C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560869 TNFAIP2-001 ENSG00000185215 9606 + 14:103123461-103137439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000560869
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000560869 4.515±0.00 10.081±0.00 7.767±0.00 1.224±0.83 1.861±1.51 2.378±0.00 1.310±0.69 12.186±9.77 0.851±0.00 3.753±2.65 3.189±0.95 1.730±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OP CIL_0000OP_0001 CGP 14:103100144-103137439
CIL_0001AI CIL_0001AI_0002 CGP 14:103123442-103345025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0001525 IEA angiogenesis
GO:0005615 TAS extracellular space
GO:0006887 IEA exocytosis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102745 Tnfaip2-001 protein_coding Mus_musculus 0 1557
ENSMUST00000156003 Tnfaip2-003 retained_intron Mus_musculus 0 859
ENSMUST00000109792 Tnfaip2-002 protein_coding Mus_musculus 0 859
ENSMUST00000174692 Tnfaip2-010 nonsense_mediated_decay Mus_musculus 0 798
ENSMUST00000127028 Tnfaip2-007 retained_intron Mus_musculus 0 497
ENSMUST00000173581 Tnfaip2-008 nonsense_mediated_decay Mus_musculus 0 497
ENSMUST00000127207 Tnfaip2-006 retained_intron Mus_musculus 0 403
ENSMUST00000174298 Tnfaip2-009 nonsense_mediated_decay Mus_musculus 0 261

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