C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000OP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205436-ENSG00000185215 CGP 9606 14:103100144-103137439
GeneTranscriptPositionBiotype
ENSG00000185215 (TNFAIP2)
tumor necrosis factor, alpha-induced protein 2 		ENST00000333007 (TNFAIP2-201) 103126327-103137439 protein_coding
ENST00000558056 (TNFAIP2-006) 103123461-103126575 protein_coding
ENST00000559195 (TNFAIP2-007) 103123442-103130033 processed_transcript
ENST00000559255 (TNFAIP2-005) 103132748-103136682 protein_coding
ENST00000559406 (TNFAIP2-003) 103126389-103135651 nonsense_mediated_decay
ENST00000560428 (TNFAIP2-008) 103127566-103131762 retained_intron
ENST00000560562 (TNFAIP2-002) 103126389-103135651 nonsense_mediated_decay
ENST00000560670 (TNFAIP2-004) 103127576-103135650 protein_coding
ENST00000560869 (TNFAIP2-001) 103123461-103137439 protein_coding
ENST00000561156 (TNFAIP2-009) 103131096-103133765 nonsense_mediated_decay
ENST00000561217 (TNFAIP2-010) 103136403-103137432 processed_transcript
ENSG00000205436 (EXOC3L4)
exocyst complex component 3-like 4 		ENST00000380069 (EXOC3L4-001) 103100144-103110271 protein_coding
ENST00000559116 (EXOC3L4-005) 103100328-103104328 protein_coding
ENST00000559661 (EXOC3L4-003) 103104350-103110064 nonsense_mediated_decay
ENST00000559693 (EXOC3L4-004) 103107622-103110559 retained_intron
ENST00000560102 (EXOC3L4-006) 103103552-103104328 retained_intron
ENST00000560304 (EXOC3L4-007) 103107516-103110559 protein_coding
ENST00000560925 (EXOC3L4-002) 103102377-103110547 retained_intron
ENSG00000259717 (LINC00677)
long intergenic non-protein coding RNA 677 		ENST00000558224 (LINC00677-002) 103120847-103122909 lincRNA
ENST00000560742 (LINC00677-001) 103120853-103123007 lincRNA
CIL_0000OP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021280-ENSMUSG00000021281 CGP 10090 12:111417430-111455018
GeneTranscriptPositionBiotype
ENSMUSG00000021280 (Exoc3l4)
exocyst complex component 3-like 4 		ENSMUST00000072646 (Exoc3l4-201) 111417430-111431182 protein_coding
ENSMUSG00000021281 (Tnfaip2)
tumor necrosis factor, alpha-induced protein 2 		ENSMUST00000102745 (Tnfaip2-001) 111442469-111455018 protein_coding
ENSMUST00000109792 (Tnfaip2-002) 111442658-111454678 protein_coding
ENSMUST00000127028 (Tnfaip2-007) 111450519-111453626 retained_intron
ENSMUST00000127207 (Tnfaip2-006) 111449518-111451469 retained_intron
ENSMUST00000129467 (Tnfaip2-004) 111444324-111445511 protein_coding
ENSMUST00000133865 (Tnfaip2-005) 111448135-111449311 retained_intron
ENSMUST00000156003 (Tnfaip2-003) 111442662-111454678 retained_intron
ENSMUST00000172783 (Tnfaip2-011) 111442662-111448587 nonsense_mediated_decay
ENSMUST00000173581 (Tnfaip2-008) 111449873-111453759 nonsense_mediated_decay
ENSMUST00000174298 (Tnfaip2-009) 111444998-111453825 nonsense_mediated_decay
ENSMUST00000174692 (Tnfaip2-010) 111446084-111453825 nonsense_mediated_decay
ENSMUSG00000097081 (Gm10425)
predicted gene 10425 		ENSMUST00000181085 (Gm10425-201) 111426874-111430946 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OP_0001ENSG00000185215ENST00000333007ENST00000558056ENST00000559195ENST00000559255ENST00000559406ENST00000560428ENST00000560562ENST00000560670ENST00000560869ENST00000561156ENST00000561217ENSG00000205436ENST00000380069ENST00000559116ENST00000559661ENST00000559693ENST00000560102ENST00000560304ENST00000560925ENSG00000259717ENST00000558224ENST00000560742CIL_0000OP_0002ENSMUSG00000021280ENSMUST00000072646ENSMUSG00000021281ENSMUST00000102745ENSMUST00000109792ENSMUST00000127028ENSMUST00000127207ENSMUST00000129467ENSMUST00000133865ENSMUST00000156003ENSMUST00000172783ENSMUST00000173581ENSMUST00000174298ENSMUST00000174692ENSMUSG00000097081ENSMUST00000181085
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000OP_0001ENSG00000185215ENST00000333007ENST00000559195ENST00000559255ENST00000559406ENST00000560670ENST00000560869ENST00000561217ENSG00000205436ENST00000380069ENST00000559116ENST00000559661ENST00000559693ENST00000560102ENST00000560925ENSG00000259717ENST00000558224ENST00000560742CIL_0000OP_0002ENSMUSG00000021280ENSMUST00000072646ENSMUSG00000021281ENSMUST00000102745ENSMUST00000109792ENSMUST00000127028ENSMUST00000129467ENSMUST00000133865ENSMUST00000156003ENSMUST00000174692ENSMUSG00000097081ENSMUST00000181085
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185215 ENST00000333007 1.493±0.00 N/A 0.407±0.00 0.634±0.00 3.060±0.84 2.397±0.00 1.009±0.55 4.368±0.00 2.057±0.00 6.003±3.23 1.084±0.00 4.234±2.71 8.826±1.10 2.213±0.00
ENST00000558056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559195 N/A N/A 1.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559255 4.912±0.00 N/A N/A 1.173±0.00 11.765±0.00 N/A N/A N/A N/A N/A N/A 12.370±10.84 25.132±0.00 13.606±7.79
ENST00000559406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.058±0.00 N/A N/A 5.350±0.00
ENST00000560428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560670 N/A N/A N/A N/A N/A N/A 0.743±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560869 4.515±0.00 10.081±0.00 N/A N/A 7.767±0.00 1.224±0.83 1.861±1.51 2.378±0.00 1.310±0.69 12.186±9.77 0.851±0.00 3.753±2.65 3.189±0.95 1.730±0.00
ENST00000561156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561217 N/A N/A N/A 1.958±0.00 9.693±0.00 4.194±0.00 N/A N/A N/A N/A N/A 24.484±6.81 N/A N/A
ENSG00000205436 ENST00000380069 0.016±0.00 1.378±0.00 N/A N/A 0.036±0.00 0.174±0.00 0.128±0.00 N/A 1.277±0.00 0.328±0.03 N/A 0.817±0.27 0.252±0.00 0.242±0.00
ENST00000559116 N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A 0.741±0.00 N/A N/A
ENST00000559661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.737±0.00 N/A
ENST00000559693 N/A 1.420±0.00 0.138±0.00 N/A N/A N/A N/A N/A 5.515±0.00 0.481±0.00 N/A 1.006±0.44 0.649±0.15 1.193±0.00
ENST00000560102 0.292±0.00 N/A N/A 0.158±0.00 0.141±0.00 0.786±0.00 N/A N/A N/A N/A N/A 2.124±0.00 N/A N/A
ENST00000560304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560925 N/A N/A 0.279±0.00 0.024±0.00 0.062±0.00 0.077±0.00 0.071±0.00 N/A N/A N/A N/A 0.562±0.00 0.610±0.00 0.309±0.00
ENSG00000259717 ENST00000558224 N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A 2.084±1.62
ENST00000560742 N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A 6.984±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021280 ENSMUST00000072646 1.739±0.55 0.862±0.46 1.766±0.28 0.558±0.49 4.217±2.00 0.243±0.00 1.237±0.27 6.119±1.39 5.113±4.89 7.108±1.06 0.192±0.11 5.071±2.22 55.480±31.81 0.729±0.38
ENSMUSG00000021281 ENSMUST00000102745 7.656±1.65 9.003±1.55 40.254±19.10 0.386±0.03 12.987±4.61 5.509±1.15 14.329±1.27 13.727±0.87 21.781±14.57 14.390±1.57 10.851±2.10 10.928±4.88 14.655±8.82 23.119±11.48
ENSMUST00000109792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±0.00 9.013±0.00 N/A
ENSMUST00000127028 N/A N/A N/A 1.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.017±0.00
ENSMUST00000133865 N/A N/A N/A 0.637±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 58.412±25.26 13.889±0.00
ENSMUST00000156003 N/A 1.709±0.59 7.699±1.80 N/A 1.632±0.00 0.884±0.18 N/A N/A 3.933±2.13 2.055±0.13 N/A 1.747±0.17 N/A N/A
ENSMUST00000172783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.343±0.00
ENSMUSG00000097081 ENSMUST00000181085 0.237±0.00 N/A N/A 0.196±0.15 0.594±0.00 0.475±0.01 N/A 1.405±0.00 0.078±0.02 N/A 0.078±0.04 1.030±0.21 12.606±4.93 0.335±0.00

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