C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559255 TNFAIP2-005 ENSG00000185215 9606 + 14:103132748-103136682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastOvaryPlacentaTestisENST00000559255
Transcript ID Adipose Brain Breast Ovary Placenta Testis
ENST00000559255 4.912±0.00 1.173±0.00 11.765±0.00 12.370±10.84 25.132±0.00 13.606±7.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OP CIL_0000OP_0001 CGP 14:103100144-103137439
CIL_0001AI CIL_0001AI_0002 CGP 14:103123442-103345025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0006887 IEA exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127028 Tnfaip2-007 retained_intron Mus_musculus 0 481
ENSMUST00000173581 Tnfaip2-008 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000174692 Tnfaip2-010 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000156003 Tnfaip2-003 retained_intron Mus_musculus 0 481
ENSMUST00000109792 Tnfaip2-002 protein_coding Mus_musculus 0 481
ENSMUST00000102745 Tnfaip2-001 protein_coding Mus_musculus 0 481
ENSMUST00000127207 Tnfaip2-006 retained_intron Mus_musculus 0 346
ENSMUST00000174298 Tnfaip2-009 nonsense_mediated_decay Mus_musculus 0 244

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