C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: slit homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187122 SLIT1 9606 - 10:96998038-97185920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266058 SLIT1-001 96998038-97185920 protein_coding
  ENST00000314867 SLIT1-006 97037698-97185623 protein_coding
  ENST00000371041 SLIT1-004 97057742-97185920 protein_coding
  ENST00000371070 SLIT1-003 97001113-97185758 protein_coding
  ENST00000456008 SLIT1-009 97157334-97185853 processed_transcript
  ENST00000494968 SLIT1-002 96998120-96999666 processed_transcript
  ENST00000497714 SLIT1-008 97065513-97102556 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000266058ENST00000314867
Transcript ID Brain Ovary
ENST00000266058 5.727±1.20 2.279±0.00
ENST00000314867 4.547±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0001 VISTA 10:96654859-97255972
CIL_0003F3 CIL_0003F3_0001 CGP 10:96998038-97292637

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 NAS:IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 NAS extracellular space
GO:0007409 IEA axonogenesis
GO:0007411 IDA axon guidance
GO:0007420 IEA brain development
GO:0008045 IMP motor neuron axon guidance
GO:0021510 IEA spinal cord development
GO:0021772 IEA olfactory bulb development
GO:0022028 IEA tangential migration from the subventricular zone to the olfactory bulb
GO:0022029 IEA telencephalon cell migration
GO:0031290 IEA retinal ganglion cell axon guidance
GO:0033563 IEA dorsal/ventral axon guidance
GO:0040023 IEA establishment of nucleus localization
GO:0043395 IEA heparan sulfate proteoglycan binding
GO:0048495 IPI Roundabout binding
GO:0048812 IEA neuron projection morphogenesis
GO:0048843 IEA negative regulation of axon extension involved in axon guidance
GO:0048846 IDA axon extension involved in axon guidance
GO:0048853 NAS forebrain morphogenesis
GO:0050919 IDA negative chemotaxis
GO:0051964 ISS negative regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039528 slit1b slit homolog 1b (Drosophila) protein_coding Danio_rerio
ENSDARG00000044954 slit1a slit homolog 1a (Drosophila) protein_coding Danio_rerio
ENSMUSG00000025020 Slit1 slit homolog 1 (Drosophila) protein_coding Mus_musculus

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