C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003F3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187122-ENSG00000269891 CGP 9606 10:96998038-97292637
GeneTranscriptPositionBiotype
ENSG00000187122 (SLIT1)
slit homolog 1 (Drosophila) 		ENST00000266058 (SLIT1-001) 96998038-97185920 protein_coding
ENST00000314867 (SLIT1-006) 97037698-97185623 protein_coding
ENST00000371041 (SLIT1-004) 97057742-97185920 protein_coding
ENST00000371070 (SLIT1-003) 97001113-97185758 protein_coding
ENST00000456008 (SLIT1-009) 97157334-97185853 processed_transcript
ENST00000494968 (SLIT1-002) 96998120-96999666 processed_transcript
ENST00000497714 (SLIT1-008) 97065513-97102556 processed_transcript
ENSG00000213390 (ARHGAP19)
Rho GTPase activating protein 19 		ENST00000358308 (ARHGAP19-201) 97222176-97292673 protein_coding
ENST00000358531 (ARHGAP19-003) 97222173-97292656 protein_coding
ENST00000371027 (ARHGAP19-002) 97225309-97270664 protein_coding
ENST00000466484 (ARHGAP19-006) 97259430-97292635 protein_coding
ENST00000487035 (ARHGAP19-005) 97222180-97256515 processed_transcript
ENST00000492211 (ARHGAP19-004) 97222173-97292623 nonsense_mediated_decay
ENST00000493068 (ARHGAP19-007) 97265380-97292637 retained_intron
ENSG00000231398 (RP11-375N9.2)
 ENST00000456509 (RP11-375N9.2-001) 97275012-97278097 processed_pseudogene
ENSG00000234855 (SLIT1-AS1)
SLIT1 antisense RNA 1 		ENST00000424428 (SLIT1-AS1-001) 97102756-97103747 antisense
CIL_0003F3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025020-ENSMUSG00000025154 CGP 10090 19:41600257-41802084
GeneTranscriptPositionBiotype
ENSMUSG00000025020 (Slit1)
slit homolog 1 (Drosophila) 		ENSMUST00000025993 (Slit1-001) 41600259-41743665 protein_coding
ENSMUST00000166496 (Slit1-004) 41600451-41743492 protein_coding
ENSMUST00000169141 (Slit1-002) 41600257-41743492 protein_coding
ENSMUST00000169416 (Slit1-005) 41604369-41608530 retained_intron
ENSMUST00000171586 (Slit1-003) 41646103-41743486 protein_coding
ENSMUSG00000025154 (Arhgap19)
Rho GTPase activating protein 19 		ENSMUST00000026150 (Arhgap19-001) 41766588-41802047 protein_coding
ENSMUST00000163265 (Arhgap19-201) 41766591-41802084 protein_coding
ENSMUST00000176266 (Arhgap19-003) 41769800-41781336 protein_coding
ENSMUST00000177495 (Arhgap19-002) 41769994-41802047 protein_coding
ENSMUSG00000088220 (Gm22601)
predicted gene, 22601 		ENSMUST00000157595 (Gm22601-201) 41744804-41745053 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003F3_0001ENSG00000187122ENST00000266058ENST00000314867ENST00000371041ENST00000371070ENST00000456008ENST00000494968ENST00000497714ENSG00000213390ENST00000358308ENST00000358531ENST00000371027ENST00000466484ENST00000487035ENST00000492211ENST00000493068ENSG00000231398ENST00000456509ENSG00000234855ENST00000424428CIL_0003F3_0002ENSMUSG00000025020ENSMUST00000025993ENSMUST00000166496ENSMUST00000169141ENSMUST00000169416ENSMUST00000171586ENSMUSG00000025154ENSMUST00000026150ENSMUST00000163265ENSMUST00000176266ENSMUST00000177495ENSMUSG00000088220ENSMUST00000157595
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003F3_0001ENSG00000187122ENST00000266058ENST00000314867ENSG00000213390ENST00000358308ENST00000358531ENST00000371027ENST00000487035ENSG00000231398ENST00000456509ENSG00000234855ENST00000424428CIL_0003F3_0002ENSMUSG00000025020ENSMUST00000025993ENSMUST00000166496ENSMUST00000169141ENSMUST00000169416ENSMUSG00000025154ENSMUST00000026150ENSMUST00000163265ENSMUST00000176266ENSMUSG00000088220ENSMUST00000157595
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187122 ENST00000266058 N/A N/A N/A 5.727±1.20 N/A N/A N/A N/A N/A N/A N/A 2.279±0.00 N/A N/A
ENST00000314867 N/A N/A N/A 4.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213390 ENST00000358308 N/A 1.387±0.00 N/A N/A N/A 0.461±0.00 N/A 0.274±0.00 N/A 0.906±0.02 0.403±0.00 N/A N/A N/A
ENST00000358531 1.351±0.00 N/A 0.102±0.00 N/A 1.029±0.00 0.502±0.00 0.410±0.25 0.830±0.32 0.726±0.16 0.943±0.12 N/A 1.366±0.80 0.799±0.24 4.917±0.43
ENST00000371027 N/A N/A N/A N/A 1.066±0.00 0.664±0.00 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000466484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487035 1.274±0.00 0.749±0.00 N/A 1.208±0.00 1.465±0.00 0.627±0.00 0.196±0.00 0.996±0.00 0.249±0.00 0.823±0.00 N/A 2.586±0.37 1.316±0.94 16.443±0.00
ENST00000492211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231398 ENST00000456509 N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A 0.829±0.00
ENSG00000234855 ENST00000424428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.685±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025020 ENSMUST00000025993 N/A 0.979±0.23 N/A 5.038±0.00 0.043±0.01 0.096±0.02 0.008±0.00 0.044±0.02 0.064±0.06 0.017±0.01 N/A 0.236±0.08 5.228±7.15 N/A
ENSMUST00000166496 0.045±0.00 N/A 0.016±0.00 4.058±0.00 0.047±0.02 N/A N/A 0.005±0.00 0.021±0.00 N/A N/A 0.096±0.05 26.017±0.00 0.650±0.00
ENSMUST00000169141 0.047±0.02 2.845±1.36 0.031±0.01 7.987±3.21 0.100±0.03 0.226±0.12 0.021±0.01 0.022±0.01 0.055±0.03 0.042±0.02 0.186±0.05 0.263±0.07 6.193±6.27 0.141±0.00
ENSMUST00000169416 N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 0.147±0.00 N/A 0.358±0.00 N/A N/A N/A
ENSMUST00000171586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025154 ENSMUST00000026150 1.057±0.50 1.128±0.00 0.682±0.21 2.108±1.39 1.192±0.24 0.803±0.55 0.570±0.25 0.593±0.13 13.490±8.62 1.364±0.03 1.674±0.40 3.438±1.80 3.975±2.62 20.098±5.57
ENSMUST00000163265 N/A 0.998±0.09 N/A N/A 1.378±0.66 1.047±0.26 0.169±0.00 0.510±0.00 0.774±0.21 N/A 0.933±0.82 3.483±1.91 0.188±0.00 N/A
ENSMUST00000176266 N/A 0.686±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088220 ENSMUST00000157595 N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A 1.627±0.00 N/A

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