C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341864 TAF9B-001 ENSG00000187325 9606 - X:78129748-78139706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341864 8.425±0.00 4.665±0.00 2.664±0.00 9.377±1.82 4.637±1.98 5.458±2.32 4.198±1.48 3.767±0.93 3.257±2.19 2.753±0.66 3.328±2.57 2.588±1.14 2.577±0.71 5.041±3.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0001 CGP X:78065188-78139706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IC transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005669 IDA transcription factor TFIID complex
GO:0006352 IEA DNA-templated transcription, initiation
GO:0030307 IMP positive regulation of cell growth
GO:0033276 IDA transcription factor TFTC complex
GO:0043066 IMP negative regulation of apoptotic process
GO:0046982 IEA protein heterodimerization activity
GO:0050821 IDA protein stabilization
GO:1902166 IC negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113495 Taf9b-002 protein_coding Mus_musculus 0 1033
ENSMUST00000055497 Taf9b-001 protein_coding Mus_musculus 0 1033
ENSMUST00000134547 Taf9b-003 protein_coding Mus_musculus 0 368
ENSMUST00000053568 Lingo1-001 protein_coding Mus_musculus 0.000004 58

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