C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102144-ENSG00000187325 CGP 9606 X:78065188-78139706
GeneTranscriptPositionBiotype
ENSG00000102144 (PGK1)
phosphoglycerate kinase 1 		ENST00000373316 (PGK1-001) 78104174-78129296 protein_coding
ENST00000474281 (PGK1-002) 78122839-78123338 processed_transcript
ENST00000476531 (PGK1-005) 78124944-78126267 processed_transcript
ENST00000477335 (PGK1-003) 78065188-78113844 processed_transcript
ENST00000491291 (PGK1-004) 78065216-78122903 processed_transcript
ENSG00000187325 (TAF9B)
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa 		ENST00000341864 (TAF9B-001) 78129748-78139706 protein_coding
ENST00000480681 (TAF9B-002) 78131721-78139622 retained_intron
CIL_0001YZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062070-ENSMUSG00000047242 CGP 10090 X:106187100-106221158
GeneTranscriptPositionBiotype
ENSMUSG00000047242 (Taf9b)
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor 		ENSMUST00000055497 (Taf9b-001) 106206883-106219901 protein_coding
ENSMUST00000113495 (Taf9b-002) 106206883-106221158 protein_coding
ENSMUST00000134547 (Taf9b-003) 106218340-106220750 protein_coding
ENSMUSG00000062070 (Pgk1)
phosphoglycerate kinase 1 		ENSMUST00000081593 (Pgk1-001) 106187100-106203699 protein_coding
ENSMUST00000133559 (Pgk1-002) 106191628-106194776 retained_intron
ENSMUST00000135949 (Pgk1-003) 106187163-106203661 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YZ_0001ENSG00000102144ENST00000373316ENST00000474281ENST00000476531ENST00000477335ENST00000491291ENSG00000187325ENST00000341864ENST00000480681CIL_0001YZ_0002ENSMUSG00000047242ENSMUST00000055497ENSMUST00000113495ENSMUST00000134547ENSMUSG00000062070ENSMUST00000081593ENSMUST00000133559ENSMUST00000135949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YZ_0001ENSG00000102144ENST00000373316ENST00000476531ENST00000491291ENSG00000187325ENST00000341864ENST00000480681CIL_0001YZ_0002ENSMUSG00000047242ENSMUST00000055497ENSMUST00000113495ENSMUSG00000062070ENSMUST00000081593ENSMUST00000133559ENSMUST00000135949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102144 ENST00000373316 5.529±0.00 6.434±0.00 1.871±0.00 23.499±0.52 5.608±1.09 5.056±3.44 7.589±3.82 14.893±8.95 4.686±0.16 5.862±0.99 8.734±3.15 11.608±4.20 20.540±12.85 4.612±1.80
ENST00000474281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476531 52.636±0.00 62.901±0.00 N/A 121.597±0.00 70.107±0.00 76.813±0.00 40.023±0.00 146.777±0.00 17.831±0.00 33.076±0.00 N/A 44.036±8.35 N/A 39.696±0.00
ENST00000477335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491291 N/A N/A N/A 76.966±0.00 9.114±0.00 38.515±24.74 N/A 78.128±65.96 12.209±0.00 10.805±0.00 35.767±0.00 43.603±21.95 68.509±0.00 7.129±0.00
ENSG00000187325 ENST00000341864 8.425±0.00 4.665±0.00 2.664±0.00 9.377±1.82 4.637±1.98 5.458±2.32 4.198±1.48 3.767±0.93 3.257±2.19 2.753±0.66 3.328±2.57 2.588±1.14 2.577±0.71 5.041±3.88
ENST00000480681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.988±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047242 ENSMUST00000055497 0.767±0.13 1.422±0.58 1.122±0.27 1.150±0.47 1.044±0.27 0.743±0.29 N/A 1.226±0.23 0.372±0.07 0.797±0.04 1.254±0.15 1.575±1.09 4.785±0.00 N/A
ENSMUST00000113495 3.908±0.95 3.031±1.35 7.274±0.00 2.916±0.12 3.897±0.94 1.539±0.52 4.243±0.38 6.606±0.44 1.474±1.32 6.335±1.39 3.020±0.73 2.629±1.23 5.389±4.86 6.466±2.56
ENSMUST00000134547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062070 ENSMUST00000081593 48.620±0.65 25.521±2.38 65.764±6.20 77.863±8.26 54.464±39.97 32.204±8.77 102.797±3.74 143.005±19.58 111.620±51.93 25.486±4.93 304.468±32.01 25.299±16.72 104.147±72.34 4.262±1.26
ENSMUST00000133559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.243±0.00 N/A N/A
ENSMUST00000135949 N/A 7.250±2.12 N/A N/A 14.569±2.97 15.353±6.78 N/A 41.008±0.00 20.421±4.91 3.490±0.18 N/A 20.661±4.39 N/A N/A

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