C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily V, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187688 TRPV2 9606 + 17:16415542-16437003 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338560 TRPV2-001 16415542-16437003 protein_coding
  ENST00000455666 TRPV2-006 16419337-16423767 protein_coding
  ENST00000475513 TRPV2-004 16433232-16437003 retained_intron
  ENST00000493434 TRPV2-005 16434702-16437003 retained_intron
  ENST00000577277 TRPV2-007 16428376-16437003 protein_coding
  ENST00000577865 TRPV2-011 16432238-16437001 protein_coding
  ENST00000580788 TRPV2-010 16432066-16437003 protein_coding
  ENST00000581560 TRPV2-009 16432055-16437003 protein_coding
  ENST00000583241 TRPV2-008 16428330-16432269 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338560ENST00000455666ENST00000475513ENST00000577277ENST00000577865ENST00000580788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338560 6.764±0.00 12.115±0.00 N/A 1.824±0.01 5.097±0.00 7.020±0.00 1.601±1.41 2.274±0.00 1.076±0.00 13.604±11.01 0.309±0.00 8.113±2.76 12.248±6.58 2.467±1.85
ENST00000455666 N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A 2.988±0.00 1.256±0.00 N/A N/A
ENST00000475513 N/A N/A N/A N/A N/A 1.154±0.00 N/A N/A N/A N/A N/A 3.032±0.00 N/A 0.374±0.00
ENST00000577277 N/A N/A N/A N/A N/A N/A N/A 1.130±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577865 N/A N/A N/A N/A N/A N/A N/A N/A 1.844±0.00 N/A N/A N/A N/A N/A
ENST00000580788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.587±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NT CIL_0000NT_0001 CGP 17:16415542-16492153

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 TAS:IEA ion channel activity
GO:0005261 IDA cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0007600 TAS sensory perception
GO:0009266 IDA response to temperature stimulus
GO:0009408 IEA response to heat
GO:0009986 IEA cell surface
GO:0012505 IEA endomembrane system
GO:0015075 TAS ion transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0030424 IEA axon
GO:0032584 IEA growth cone membrane
GO:0034220 TAS ion transmembrane transport
GO:0044295 IEA axonal growth cone
GO:0044297 IEA cell body
GO:0045773 IEA positive regulation of axon extension
GO:0055085 TAS transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport
GO:0090280 IEA positive regulation of calcium ion import

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059883 trpv1 transient receptor potential cation channel, subfamily V, member 1 protein_coding Danio_rerio
ENSMUSG00000018507 Trpv2 transient receptor potential cation channel, subfamily V, member 2 protein_coding Mus_musculus

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