C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000NT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187688-ENSG00000181350 CGP 9606 17:16415542-16492153
GeneTranscriptPositionBiotype
ENSG00000187688 (TRPV2)
transient receptor potential cation channel, subfamily V, member 2 		ENST00000338560 (TRPV2-001) 16415542-16437003 protein_coding
ENST00000455666 (TRPV2-006) 16419337-16423767 protein_coding
ENST00000475513 (TRPV2-004) 16433232-16437003 retained_intron
ENST00000493434 (TRPV2-005) 16434702-16437003 retained_intron
ENST00000577277 (TRPV2-007) 16428376-16437003 protein_coding
ENST00000577865 (TRPV2-011) 16432238-16437001 protein_coding
ENST00000580788 (TRPV2-010) 16432066-16437003 protein_coding
ENST00000581560 (TRPV2-009) 16432055-16437003 protein_coding
ENST00000583241 (TRPV2-008) 16428330-16432269 processed_transcript
ENSG00000264739 (RP11-138I1.2)
 ENST00000580996 (RP11-138I1.2-001) 16414524-16416689 antisense
ENSG00000266651 (RP11-138I1.3)
 ENST00000585048 (RP11-138I1.3-001) 16440479-16440952 lincRNA
CIL_0000NT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018507-ENSMUSG00000046417 CGP 10090 11:62574486-62648523
GeneTranscriptPositionBiotype
ENSMUSG00000018507 (Trpv2)
transient receptor potential cation channel, subfamily V, member 2 		ENSMUST00000018651 (Trpv2-001) 62574538-62600515 protein_coding
ENSMUST00000102643 (Trpv2-003) 62576125-62600299 protein_coding
ENSMUST00000130569 (Trpv2-005) 62575547-62581304 processed_transcript
ENSMUST00000151195 (Trpv2-002) 62574486-62600299 processed_transcript
ENSMUST00000153486 (Trpv2-004) 62581267-62600299 processed_transcript
ENSMUSG00000046417 (Lrrc75a)
leucine rich repeat containing 75A 		ENSMUST00000057194 (Lrrc75a-001) 62604884-62648523 protein_coding
ENSMUST00000128705 (Lrrc75a-003) 62605823-62648040 processed_transcript
ENSMUST00000143262 (Lrrc75a-002) 62606027-62648049 processed_transcript
ENSMUSG00000077457 (Snord65)
small nucleolar RNA, C/D box 65 		ENSMUST00000104269 (Snord65-201) 62604515-62604586 snoRNA
ENSMUSG00000085170 (Lrrc75aos1)
leucine rich repeat containing 75A, opposite strand 1 		ENSMUST00000142492 (Lrrc75aos1-001) 62634704-62638788 antisense
ENSMUSG00000086841 (2410006H16Rik)
RIKEN cDNA 2410006H16 gene 		ENSMUST00000131787 (2410006H16Rik-001) 62602877-62604807 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NT_0001ENSG00000187688ENST00000338560ENST00000455666ENST00000475513ENST00000493434ENST00000577277ENST00000577865ENST00000580788ENST00000581560ENST00000583241ENSG00000264739ENST00000580996ENSG00000266651ENST00000585048CIL_0000NT_0002ENSMUSG00000018507ENSMUST00000018651ENSMUST00000102643ENSMUST00000130569ENSMUST00000151195ENSMUST00000153486ENSMUSG00000046417ENSMUST00000057194ENSMUST00000128705ENSMUST00000143262ENSMUSG00000077457ENSMUST00000104269ENSMUSG00000085170ENSMUST00000142492ENSMUSG00000086841ENSMUST00000131787
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NT_0001ENSG00000187688ENST00000338560ENST00000455666ENST00000475513ENST00000577277ENST00000577865ENST00000580788ENSG00000264739ENST00000580996ENSG00000266651ENST00000585048CIL_0000NT_0002ENSMUSG00000018507ENSMUST00000018651ENSMUST00000102643ENSMUST00000130569ENSMUST00000151195ENSMUSG00000046417ENSMUST00000057194ENSMUST00000128705ENSMUSG00000077457ENSMUST00000104269ENSMUSG00000085170ENSMUST00000142492ENSMUSG00000086841ENSMUST00000131787
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187688 ENST00000338560 6.764±0.00 12.115±0.00 N/A 1.824±0.01 5.097±0.00 7.020±0.00 1.601±1.41 2.274±0.00 1.076±0.00 13.604±11.01 0.309±0.00 8.113±2.76 12.248±6.58 2.467±1.85
ENST00000455666 N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A 2.988±0.00 1.256±0.00 N/A N/A
ENST00000475513 N/A N/A N/A N/A N/A 1.154±0.00 N/A N/A N/A N/A N/A 3.032±0.00 N/A 0.374±0.00
ENST00000493434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577277 N/A N/A N/A N/A N/A N/A N/A 1.130±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577865 N/A N/A N/A N/A N/A N/A N/A N/A 1.844±0.00 N/A N/A N/A N/A N/A
ENST00000580788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.587±0.00 N/A N/A N/A
ENST00000581560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264739 ENST00000580996 N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266651 ENST00000585048 1.922±0.00 6.339±0.00 N/A 2.197±0.00 1.995±0.69 0.800±0.00 1.313±0.00 2.184±0.00 0.720±0.00 2.399±0.00 0.596±0.00 1.793±1.00 0.270±0.00 1.027±0.76
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018507 ENSMUST00000018651 3.134±0.12 1.228±0.45 4.372±0.41 3.120±2.65 4.837±1.16 2.010±1.19 0.709±0.18 0.698±0.21 1.333±1.15 4.128±1.92 0.367±0.16 2.037±0.74 14.849±10.89 0.152±0.03
ENSMUST00000102643 1.645±0.07 0.484±0.00 12.338±0.11 1.749±0.03 2.810±0.00 1.768±0.18 0.428±0.17 N/A 0.758±0.64 N/A 0.195±0.15 1.209±0.59 18.909±9.76 N/A
ENSMUST00000130569 N/A N/A 10.039±0.45 2.355±0.00 N/A 2.909±0.91 N/A 0.437±0.07 N/A N/A 0.218±0.02 2.562±0.00 N/A 0.147±0.00
ENSMUST00000151195 1.083±0.00 0.218±0.00 N/A 0.478±0.19 1.860±0.43 N/A 0.111±0.00 0.123±0.01 0.093±0.07 1.115±0.01 0.141±0.00 0.842±0.16 N/A N/A
ENSMUST00000153486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046417 ENSMUST00000057194 4.166±2.41 17.049±1.85 6.756±0.49 8.288±5.37 3.486±0.90 25.289±2.62 1.852±0.21 2.312±0.35 0.670±0.45 7.931±1.22 1.051±0.26 16.713±6.35 4.548±6.98 3.166±0.84
ENSMUST00000128705 N/A 12.128±5.41 N/A N/A 1.662±0.00 N/A N/A 0.875±0.00 N/A N/A N/A N/A N/A 3.344±0.00
ENSMUST00000143262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077457 ENSMUST00000104269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 462.840±0.00 2381.100±0.00 N/A
ENSMUSG00000085170 ENSMUST00000142492 N/A 0.138±0.04 0.024±0.00 0.075±0.00 N/A 0.094±0.00 0.041±0.00 0.042±0.00 0.025±0.01 0.053±0.00 0.094±0.00 0.232±0.08 0.152±0.18 0.719±0.27
ENSMUSG00000086841 ENSMUST00000131787 56.372±23.39 32.047±2.09 66.746±12.32 100.175±40.64 39.938±15.25 30.872±8.77 7.421±1.52 22.309±1.64 76.915±70.07 28.985±3.48 14.622±2.33 104.815±37.35 70.460±31.63 31.337±1.49

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