C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily V, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018507 Trpv2 10090 + 11:62574486-62600515 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018651 Trpv2-001 62574538-62600515 protein_coding
  ENSMUST00000102643 Trpv2-003 62576125-62600299 protein_coding
  ENSMUST00000130569 Trpv2-005 62575547-62581304 processed_transcript
  ENSMUST00000151195 Trpv2-002 62574486-62600299 processed_transcript
  ENSMUST00000153486 Trpv2-004 62581267-62600299 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018651ENSMUST00000102643ENSMUST00000130569ENSMUST00000151195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018651 3.134±0.12 1.228±0.45 4.372±0.41 3.120±2.65 4.837±1.16 2.010±1.19 0.709±0.18 0.698±0.21 1.333±1.15 4.128±1.92 0.367±0.16 2.037±0.74 14.849±10.89 0.152±0.03
ENSMUST00000102643 1.645±0.07 0.484±0.00 12.338±0.11 1.749±0.03 2.810±0.00 1.768±0.18 0.428±0.17 N/A 0.758±0.64 N/A 0.195±0.15 1.209±0.59 18.909±9.76 N/A
ENSMUST00000130569 N/A N/A 10.039±0.45 2.355±0.00 N/A 2.909±0.91 N/A 0.437±0.07 N/A N/A 0.218±0.02 2.562±0.00 N/A 0.147±0.00
ENSMUST00000151195 1.083±0.00 0.218±0.00 N/A 0.478±0.19 1.860±0.43 N/A 0.111±0.00 0.123±0.01 0.093±0.07 1.115±0.01 0.141±0.00 0.842±0.16 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NT CIL_0000NT_0002 CGP 11:62574486-62648523

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 ISO cation channel activity
GO:0005262 IDA calcium channel activity
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005886 ISO plasma membrane
GO:0009266 ISO response to temperature stimulus
GO:0009408 IEA response to heat
GO:0009986 IDA cell surface
GO:0012505 IEA endomembrane system
GO:0016021 IEA integral component of membrane
GO:0030424 IDA axon
GO:0032584 IDA growth cone membrane
GO:0044295 IDA axonal growth cone
GO:0044297 IDA cell body
GO:0045773 IMP positive regulation of axon extension
GO:0070588 IEA calcium ion transmembrane transport
GO:0090280 IMP positive regulation of calcium ion import

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059883 trpv1 transient receptor potential cation channel, subfamily V, member 1 protein_coding Danio_rerio
ENSG00000187688 TRPV2 transient receptor potential cation channel, subfamily V, member 2 protein_coding Homo_sapiens

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