C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily V, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000059883 trpv1 7955 + 5:43754941-43777138 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000083731 trpv1-201 43754941-43777138 protein_coding
  ENSDART00000140743 trpv1-001 43760511-43774636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000083731ENSDART00000140743
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000083731 0.381±0.18 0.705±0.43 1.124±0.75 0.094±0.00 0.190±0.00
ENSDART00000140743 0.247±0.00 0.473±0.00 1.086±0.00 0.131±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031U CIL_00031U_0001 CGP 5:43743288-43777138

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187688 TRPV2 transient receptor potential cation channel, subfamily V, member 2 protein_coding Homo_sapiens
ENSG00000196689 TRPV1 transient receptor potential cation channel, subfamily V, member 1 protein_coding Homo_sapiens
ENSG00000262304 TRPV1 transient receptor potential cation channel, subfamily V, member 1 protein_coding Homo_sapiens
ENSMUSG00000005952 Trpv1 transient receptor potential cation channel, subfamily V, member 1 protein_coding Mus_musculus
ENSMUSG00000018507 Trpv2 transient receptor potential cation channel, subfamily V, member 2 protein_coding Mus_musculus

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