C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA methyltransferase 2 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188917 TRMT2B 9606 - X:101009346-101052116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372935 TRMT2B-001 101009542-101052070 protein_coding
  ENST00000372936 TRMT2B-003 101009542-101052083 protein_coding
  ENST00000372939 TRMT2B-004 101009350-101052054 protein_coding
  ENST00000478422 TRMT2B-005 101023586-101052082 processed_transcript
  ENST00000488615 TRMT2B-006 101035623-101037539 processed_transcript
  ENST00000545398 TRMT2B-201 101009346-101052116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372935ENST00000372936ENST00000372939ENST00000478422ENST00000545398
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372935 N/A N/A 0.598±0.00 N/A 0.574±0.00 1.198±1.11 1.241±0.00 N/A 0.731±0.00 1.299±0.00 1.745±0.62 0.539±0.00 1.040±0.00
ENST00000372936 0.959±0.00 1.562±0.00 0.288±0.00 1.207±0.00 N/A N/A N/A N/A 0.486±0.00 1.109±0.00 N/A 0.398±0.00 0.760±0.37
ENST00000372939 0.623±0.00 2.265±0.00 0.552±0.00 N/A N/A 1.033±0.00 N/A 0.594±0.00 0.240±0.00 N/A N/A 0.844±0.00 0.718±0.00
ENST00000478422 N/A N/A N/A N/A 1.319±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545398 N/A N/A 0.590±0.23 N/A N/A 0.651±0.14 1.598±1.19 N/A 0.662±0.22 0.416±0.00 1.276±0.33 0.407±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AZ CIL_0007AZ_0001 CGP X:100969708-101052116
CIL_0007B0 CIL_0007B0_0001 CGP X:101009346-101096364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0006396 IEA RNA processing
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0008173 IEA RNA methyltransferase activity
GO:0030697 IEA S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033967 trmt2b TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000067369 Trmt2b TRM2 tRNA methyltransferase 2B protein_coding Mus_musculus

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