C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007B0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188917-ENSG00000126950 CGP 9606 X:101009346-101096364
GeneTranscriptPositionBiotype
ENSG00000126950 (TMEM35)
transmembrane protein 35
ENST00000372930 (TMEM35-001) 101078720-101096364 protein_coding
ENST00000478351 (TMEM35-002) 101081497-101094939 processed_transcript
ENSG00000188917 (TRMT2B)
tRNA methyltransferase 2 homolog B (S. cerevisiae)
ENST00000372935 (TRMT2B-001) 101009542-101052070 protein_coding
ENST00000372936 (TRMT2B-003) 101009542-101052083 protein_coding
ENST00000372939 (TRMT2B-004) 101009350-101052054 protein_coding
ENST00000478422 (TRMT2B-005) 101023586-101052082 processed_transcript
ENST00000488615 (TRMT2B-006) 101035623-101037539 processed_transcript
ENST00000545398 (TRMT2B-201) 101009346-101052116 protein_coding
ENSG00000225839 (TRMT2B-AS1)
TRMT2B antisense RNA 1
ENST00000443801 (TRMT2B-AS1-001) 101043564-101094476 sense_overlapping
CIL_0007B0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067369-ENSMUSG00000033578 CGP 10090 X:134222339-134305969
GeneTranscriptPositionBiotype
ENSMUSG00000033578 (Tmem35)
transmembrane protein 35
ENSMUST00000037687 (Tmem35-001) 134295225-134305969 protein_coding
ENSMUSG00000067369 (Trmt2b)
TRM2 tRNA methyltransferase 2B
ENSMUST00000087540 (Trmt2b-005) 134262488-134276984 protein_coding
ENSMUST00000087541 (Trmt2b-001) 134223095-134276982 protein_coding
ENSMUST00000113252 (Trmt2b-004) 134223100-134276920 protein_coding
ENSMUST00000128115 (Trmt2b-002) 134222339-134276982 nonsense_mediated_decay
ENSMUST00000145066 (Trmt2b-003) 134223096-134276927 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007B0_0001ENSG00000126950ENST00000372930ENST00000478351ENSG00000188917ENST00000372935ENST00000372936ENST00000372939ENST00000478422ENST00000488615ENST00000545398ENSG00000225839ENST00000443801CIL_0007B0_0002ENSMUSG00000033578ENSMUST00000037687ENSMUSG00000067369ENSMUST00000087540ENSMUST00000087541ENSMUST00000113252ENSMUST00000128115ENSMUST00000145066
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007B0_0001ENSG00000126950ENST00000372930ENST00000478351ENSG00000188917ENST00000372935ENST00000372936ENST00000372939ENST00000478422ENST00000545398ENSG00000225839ENST00000443801CIL_0007B0_0002ENSMUSG00000033578ENSMUST00000037687ENSMUSG00000067369ENSMUST00000087540ENSMUST00000087541ENSMUST00000113252ENSMUST00000128115ENSMUST00000145066
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126950 ENST00000372930 0.512±0.00 4.554±0.00 0.282±0.00 11.779±8.10 0.464±0.05 12.040±10.86 0.043±0.00 0.187±0.00 1.491±1.47 0.596±0.47 0.282±0.26 1.511±1.52 0.185±0.16 2.635±2.17
ENST00000478351 N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000188917 ENST00000372935 N/A N/A N/A 0.598±0.00 N/A 0.574±0.00 1.198±1.11 1.241±0.00 N/A 0.731±0.00 1.299±0.00 1.745±0.62 0.539±0.00 1.040±0.00
ENST00000372936 0.959±0.00 1.562±0.00 N/A 0.288±0.00 1.207±0.00 N/A N/A N/A N/A 0.486±0.00 1.109±0.00 N/A 0.398±0.00 0.760±0.37
ENST00000372939 0.623±0.00 2.265±0.00 N/A 0.552±0.00 N/A N/A 1.033±0.00 N/A 0.594±0.00 0.240±0.00 N/A N/A 0.844±0.00 0.718±0.00
ENST00000478422 N/A N/A N/A N/A N/A 1.319±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545398 N/A N/A N/A 0.590±0.23 N/A N/A 0.651±0.14 1.598±1.19 N/A 0.662±0.22 0.416±0.00 1.276±0.33 0.407±0.00 N/A
ENSG00000225839 ENST00000443801 1.326±0.00 3.166±0.00 N/A 0.724±0.00 1.577±0.00 0.607±0.00 0.594±0.00 0.582±0.00 0.260±0.00 0.937±0.00 0.624±0.00 5.611±0.00 N/A 1.115±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033578 ENSMUST00000037687 0.607±0.37 113.384±15.73 0.302±0.03 18.689±7.94 0.299±0.10 1.023±0.13 1.759±0.71 1.941±0.31 0.161±0.14 0.924±0.17 0.066±0.03 10.779±2.47 0.144±0.11 4.799±2.12
ENSMUSG00000067369 ENSMUST00000087540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.885±0.00 N/A 0.924±0.00
ENSMUST00000087541 4.155±1.96 5.138±1.08 6.999±0.79 2.126±1.36 4.675±1.55 3.636±1.27 7.053±0.67 4.078±1.43 3.306±1.13 2.861±0.58 3.539±0.76 5.565±1.57 2.105±0.51 0.782±0.24
ENSMUST00000113252 0.832±0.00 1.650±0.33 1.277±0.00 0.379±0.00 1.599±0.43 2.477±1.10 N/A 2.160±0.77 1.552±0.46 2.043±0.21 0.611±0.09 1.845±0.49 0.784±0.12 N/A
ENSMUST00000128115 N/A N/A 1.379±0.28 0.245±0.00 0.810±0.00 0.849±0.11 N/A 1.012±0.00 0.691±0.14 N/A 0.367±0.02 1.784±0.00 0.336±0.06 N/A
ENSMUST00000145066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.967±0.00 0.605±0.00 0.082±0.00

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