C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 120A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439537 TMEM120A-004 ENSG00000189077 9606 - 7:75986985-75994574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverMuscleTestisENST00000439537
Transcript ID Adipose Adrenal Breast Colon Heart Liver Muscle Testis
ENST00000439537 18.844±0.00 17.949±0.00 20.332±0.00 9.883±0.00 23.656±0.00 3.117±0.00 23.488±0.00 25.366±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NP CIL_0006NP_0001 CGP 7:75842602-75986855
CIL_0006NS CIL_0006NS_0001 CGP 7:75899200-75994659
CIL_0006NR CIL_0006NR_0001 CGP 7:75986837-76048004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043378 Tmem120a-001 protein_coding Mus_musculus 0 1074
ENSMUST00000127156 Tmem120a-003 retained_intron Mus_musculus 0 582
ENSMUST00000067505 Tmem120b-001 protein_coding Mus_musculus 0 435
ENSMUST00000161049 Tmem120b-006 retained_intron Mus_musculus 0 418
ENSMUST00000111619 Tmem120b-002 protein_coding Mus_musculus 0 392
ENSMUST00000153399 Tmem120a-002 protein_coding Mus_musculus 0 237

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