C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006NP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005486-ENSG00000127948 CGP 9606 7:75842602-75986855
GeneTranscriptPositionBiotype
ENSG00000005486 (RHBDD2)
rhomboid domain containing 2 		ENST00000006777 (RHBDD2-001) 75878948-75888921 protein_coding
ENST00000318622 (RHBDD2-201) 75878999-75888926 protein_coding
ENST00000428119 (RHBDD2-002) 75882044-75888921 protein_coding
ENST00000454791 (RHBDD2-006) 75879004-75888884 nonsense_mediated_decay
ENST00000466232 (RHBDD2-003) 75842602-75882124 processed_transcript
ENST00000467406 (RHBDD2-009) 75883490-75888268 processed_transcript
ENST00000468304 (RHBDD2-005) 75879172-75888583 processed_transcript
ENST00000468644 (RHBDD2-004) 75878091-75882165 processed_transcript
ENST00000476218 (RHBDD2-008) 75879140-75880305 processed_transcript
ENST00000613112 (RHBDD2-202) 75878948-75888926 protein_coding
ENST00000614848 (RHBDD2-203) 75878948-75888920 protein_coding
ENSG00000127948 (POR)
P450 (cytochrome) oxidoreductase 		ENST00000394893 (POR-009) 75915164-75986855 protein_coding
ENST00000412064 (POR-024) 75953989-75986540 nonsense_mediated_decay
ENST00000412521 (POR-002) 75915174-75980411 protein_coding
ENST00000414186 (POR-003) 75915182-75980488 protein_coding
ENST00000418341 (POR-004) 75945322-75954180 protein_coding
ENST00000421059 (POR-019) 75915157-75954109 protein_coding
ENST00000426184 (POR-022) 75967843-75980439 protein_coding
ENST00000432753 (POR-020) 75918644-75980471 protein_coding
ENST00000439269 (POR-015) 75981911-75986832 protein_coding
ENST00000439297 (POR-006) 75967845-75979537 protein_coding
ENST00000439963 (POR-018) 75907576-75981096 protein_coding
ENST00000447222 (POR-014) 75954076-75986599 protein_coding
ENST00000448410 (POR-007) 75915149-75980738 nonsense_mediated_decay
ENST00000449920 (POR-021) 75921161-75954180 protein_coding
ENST00000453773 (POR-017) 75899200-75980393 protein_coding
ENST00000454934 (POR-013) 75953989-75986854 nonsense_mediated_decay
ENST00000460892 (POR-010) 75980932-75983793 retained_intron
ENST00000461988 (POR-001) 75915079-75986855 protein_coding
ENST00000471238 (POR-008) 75915157-75979786 retained_intron
ENST00000475509 (POR-005) 75967845-75980360 processed_transcript
ENST00000487247 (POR-011) 75983436-75985307 retained_intron
ENST00000493973 (POR-016) 75985570-75986855 retained_intron
ENST00000495770 (POR-023) 75983789-75985366 retained_intron
ENST00000496888 (POR-012) 75983316-75985745 retained_intron
ENSG00000201643 (SNORA14A)
small nucleolar RNA, H/ACA box 14A 		ENST00000364773 (SNORA14A-201) 75943782-75943916 snoRNA
ENSG00000235090 (RPL7L1P3)
ribosomal protein L7-like 1 pseudogene 3 		ENST00000455249 (RPL7L1P3-001) 75922755-75923443 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006NP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039917-ENSMUSG00000005514 CGP 10090 5:135632618-135735326
GeneTranscriptPositionBiotype
ENSMUSG00000005514 (Por)
P450 (cytochrome) oxidoreductase 		ENSMUST00000005651 (Por-001) 135689036-135735326 protein_coding
ENSMUST00000122113 (Por-002) 135689158-135735326 protein_coding
ENSMUST00000127096 (Por-006) 135725728-135730241 protein_coding
ENSMUST00000132084 (Por-009) 135733181-135734047 retained_intron
ENSMUST00000147515 (Por-008) 135716005-135731878 retained_intron
ENSMUST00000149684 (Por-007) 135731550-135733915 retained_intron
ENSMUST00000150058 (Por-005) 135674581-135684982 processed_transcript
ENSMUST00000153500 (Por-003) 135670033-135731661 protein_coding
ENSMUST00000153515 (Por-004) 135674585-135731117 protein_coding
ENSMUSG00000039917 (Rhbdd2)
rhomboid domain containing 2 		ENSMUST00000043707 (Rhbdd2-001) 135632618-135646376 protein_coding
ENSMUST00000084599 (Rhbdd2-003) 135636532-135644527 retained_intron
ENSMUST00000129134 (Rhbdd2-005) 135632723-135636545 processed_transcript
ENSMUST00000130647 (Rhbdd2-006) 135632704-135637618 processed_transcript
ENSMUST00000136748 (Rhbdd2-002) 135632654-135646448 nonsense_mediated_decay
ENSMUST00000144633 (Rhbdd2-004) 135632716-135635615 retained_intron
ENSMUSG00000080972 (Gm16061)
predicted gene 16061 		ENSMUST00000122167 (Gm16061-001) 135698163-135699019 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NP_0001ENSG00000005486ENST00000006777ENST00000318622ENST00000428119ENST00000454791ENST00000466232ENST00000467406ENST00000468644ENST00000613112ENST00000614848ENSG00000127948ENST00000394893ENST00000412064ENST00000439269ENST00000454934ENST00000460892ENST00000461988ENST00000493973ENSG00000201643ENST00000364773ENSG00000235090ENST00000455249CIL_0006NP_0002ENSMUSG00000005514ENSMUST00000005651ENSMUST00000122113ENSMUST00000149684ENSMUST00000153500ENSMUSG00000039917ENSMUST00000043707ENSMUST00000084599ENSMUST00000129134ENSMUST00000136748ENSMUSG00000080972ENSMUST00000122167
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005486 ENST00000006777 N/A N/A N/A 9.813±0.00 N/A N/A 0.109±0.00 0.148±0.00 N/A 0.535±0.00 N/A 13.713±4.31 6.348±0.00 N/A
ENST00000318622 N/A 6.084±0.00 N/A N/A 1.215±0.00 N/A N/A N/A 0.867±0.00 1.401±0.00 N/A 28.098±0.00 N/A 11.106±0.05
ENST00000428119 17.384±0.00 29.607±0.00 N/A 49.491±0.00 18.653±0.00 8.283±0.00 3.198±0.00 7.658±6.80 19.154±0.00 25.120±0.00 13.932±0.00 28.287±4.27 19.205±1.15 28.081±5.73
ENST00000454791 7.305±0.00 N/A 0.355±0.00 N/A 6.078±0.00 2.747±0.00 2.462±0.00 15.255±0.00 6.795±0.00 11.581±0.00 N/A 10.262±0.00 7.505±0.60 15.777±5.75
ENST00000466232 N/A N/A 0.311±0.00 N/A N/A 0.293±0.00 0.212±0.00 N/A N/A 1.332±0.00 1.350±0.00 N/A N/A N/A
ENST00000467406 N/A N/A N/A N/A N/A N/A 0.716±0.00 N/A N/A N/A 3.231±0.00 2.138±0.00 N/A N/A
ENST00000468304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468644 N/A N/A N/A N/A N/A 0.752±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613112 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000614848 14.327±0.00 12.979±0.00 N/A 65.801±0.00 13.772±0.00 10.019±0.00 2.825±2.71 14.652±14.50 23.122±0.00 16.923±16.36 15.838±0.00 18.589±8.02 20.658±2.01 8.241±0.00
ENSG00000127948 ENST00000394893 N/A 9.921±0.00 N/A 5.255±0.00 1.402±0.00 N/A N/A 9.382±0.00 N/A 3.620±0.00 6.005±0.00 3.760±0.00 N/A N/A
ENST00000412064 14.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439269 N/A N/A N/A N/A 18.773±0.00 8.971±0.00 N/A 32.492±0.00 N/A N/A N/A N/A 13.642±0.00 N/A
ENST00000439297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454934 N/A N/A N/A N/A N/A N/A N/A N/A 53.453±0.00 N/A N/A N/A N/A N/A
ENST00000460892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.263±0.00 N/A
ENST00000461988 12.901±0.00 N/A N/A 9.527±2.84 17.720±16.13 11.718±0.00 6.461±5.11 34.273±11.87 100.408±0.00 N/A 18.939±0.00 31.614±24.81 47.556±26.60 25.814±0.00
ENST00000471238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493973 N/A N/A N/A N/A N/A N/A N/A 65.205±0.00 147.171±0.00 N/A N/A 77.260±0.00 40.172±9.40 N/A
ENST00000495770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201643 ENST00000364773 N/A N/A N/A N/A N/A 21.013±0.00 1.689±1.43 30.887±0.00 3.633±3.24 29.941±0.00 N/A 7.645±0.00 N/A N/A
ENSG00000235090 ENST00000455249 0.020±0.00 0.190±0.00 0.956±0.00 0.154±0.00 0.773±0.75 0.670±0.00 0.133±0.00 0.379±0.00 0.362±0.14 0.947±0.00 0.589±0.00 0.128±0.03 0.092±0.02 0.124±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005514 ENSMUST00000005651 90.731±26.90 151.633±32.55 59.352±3.01 30.195±11.20 77.422±27.43 60.947±5.12 19.324±5.34 114.714±9.19 67.997±36.47 139.478±12.43 5.972±0.37 64.737±18.92 44.234±9.56 7.256±0.34
ENSMUST00000122113 N/A N/A N/A 6.234±0.00 N/A N/A N/A N/A N/A N/A N/A 17.419±5.02 18.691±6.68 0.467±0.00
ENSMUST00000127096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149684 N/A N/A N/A 31.591±0.00 63.280±0.00 64.243±2.15 7.417±0.00 96.839±0.00 71.557±0.00 N/A N/A 69.976±24.16 63.791±8.84 3.788±0.49
ENSMUST00000150058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153500 N/A N/A N/A 30.442±0.00 N/A N/A N/A N/A N/A N/A N/A 39.292±0.00 38.806±1.86 6.167±0.00
ENSMUST00000153515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039917 ENSMUST00000043707 5.529±1.58 27.517±2.84 4.669±0.07 3.166±1.07 9.808±3.72 6.656±1.26 3.461±1.09 11.821±2.27 2.978±1.10 10.043±1.51 1.127±0.14 13.918±6.48 3.352±1.22 5.322±3.22
ENSMUST00000084599 1.897±0.28 N/A 2.862±0.15 1.630±0.75 2.658±0.27 1.767±0.36 0.708±0.09 1.826±0.21 0.876±0.16 1.988±0.33 0.240±0.07 2.682±0.96 1.950±0.52 1.257±0.57
ENSMUST00000129134 6.163±0.00 25.425±2.25 N/A N/A N/A 4.867±0.50 N/A N/A 2.558±0.49 7.957±0.10 1.787±0.00 11.542±1.95 5.582±1.28 12.570±1.42
ENSMUST00000130647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136748 1.634±0.00 N/A N/A 2.082±0.43 1.604±0.00 N/A N/A N/A N/A N/A N/A 1.458±0.00 N/A 5.482±0.00
ENSMUST00000144633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080972 ENSMUST00000122167 0.667±0.25 1.310±0.37 N/A 0.141±0.00 0.946±0.23 0.488±0.21 0.294±0.06 0.497±0.07 0.457±0.44 1.457±0.40 N/A 0.536±0.34 0.331±0.20 0.104±0.05

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