C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 180, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189320 FAM180A 9606 - 7:135728348-135748846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338588 FAM180A-201 135729599-135748846 protein_coding
  ENST00000415751 FAM180A-003 135733556-135748712 protein_coding
  ENST00000435869 FAM180A-002 135728348-135748813 processed_transcript
  ENST00000444083 FAM180A-001 135729607-135748619 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338588ENST00000415751ENST00000435869ENST00000444083
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338588 N/A N/A N/A N/A 0.790±0.38 0.458±0.00 3.012±2.59 N/A 2.210±0.00 1.764±0.00 N/A 0.550±0.17 0.276±0.00 0.102±0.00
ENST00000415751 N/A 0.362±0.00 0.751±0.00 0.056±0.00 0.447±0.00 N/A N/A 1.262±0.00 2.061±0.00 0.756±0.33 0.959±0.00 0.714±0.00 0.086±0.02 N/A
ENST00000435869 N/A N/A 0.212±0.00 N/A N/A 0.637±0.00 N/A N/A 1.004±0.00 N/A N/A N/A 0.075±0.00 0.066±0.00
ENST00000444083 0.900±0.00 0.131±0.00 N/A 0.057±0.00 0.709±0.00 1.151±0.04 N/A 1.928±0.41 N/A N/A 0.499±0.00 0.168±0.00 0.068±0.00 0.917±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0001 VISTA 7:135472160-136074488
CIL_0002H3 CIL_0002H3_0001 CGP 7:135681237-135748846
CIL_00024U CIL_00024U_0002 CGP 7:135728348-135977353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091378 CABZ01068473.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000047420 Fam180a family with sequence similarity 180, member A protein_coding Mus_musculus

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