C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091378-ENSDARG00000055562 CGP 7955 4:879455-933167
GeneTranscriptPositionBiotype
ENSDARG00000055562 (mtpn)
myotrophin 		ENSDART00000077942 (mtpn-001) 919720-933167 protein_coding
ENSDART00000130005 (mtpn-201) 919722-932836 protein_coding
ENSDARG00000091378 (CABZ01068473.1)
Uncharacterized protein 		ENSDART00000122289 (CABZ01068473.1-201) 879455-884019 protein_coding
CIL_00024U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189320-ENSG00000105887 CGP 9606 7:135728348-135977353
GeneTranscriptPositionBiotype
ENSG00000105887 (MTPN)
myotrophin 		ENST00000393085 (MTPN-001) 135926761-135977316 protein_coding
ENST00000435723 (MTPN-002) 135929459-135977353 protein_coding
ENSG00000164707 (SLC13A4)
solute carrier family 13 (sodium/sulfate symporter), member 4 		ENST00000354042 (SLC13A4-001) 135681237-135728186 protein_coding
ENST00000378428 (SLC13A4-007) 135708141-135729226 protein_coding
ENST00000422620 (SLC13A4-008) 135721393-135729258 protein_coding
ENST00000471405 (SLC13A4-002) 135681241-135728204 retained_intron
ENST00000478310 (SLC13A4-003) 135707437-135728174 retained_intron
ENST00000480376 (SLC13A4-004) 135699364-135705807 retained_intron
ENST00000491630 (SLC13A4-006) 135681237-135685685 processed_transcript
ENSG00000189320 (FAM180A)
family with sequence similarity 180, member A 		ENST00000338588 (FAM180A-201) 135729599-135748846 protein_coding
ENST00000415751 (FAM180A-003) 135733556-135748712 protein_coding
ENST00000435869 (FAM180A-002) 135728348-135748813 processed_transcript
ENST00000444083 (FAM180A-001) 135729607-135748619 nonsense_mediated_decay
ENSG00000199700 (RNU6-223P)
RNA, U6 small nuclear 223, pseudogene 		ENST00000362830 (RNU6-223P-201) 135960703-135960809 snRNA
ENSG00000224746 (AC015987.1)
 ENST00000419211 (AC015987.1-001) 135926455-135932881 antisense
CIL_00024U_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047420-ENSMUSG00000029840 CGP 10090 6:35312746-35539888
GeneTranscriptPositionBiotype
ENSMUSG00000029840 (Mtpn)
myotrophin 		ENSMUST00000031866 (Mtpn-001) 35508906-35539888 protein_coding
ENSMUSG00000047420 (Fam180a)
family with sequence similarity 180, member A 		ENSMUST00000051176 (Fam180a-201) 35312746-35326141 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024U_0001ENSDARG00000055562ENSDART00000077942ENSDART00000130005ENSDARG00000091378ENSDART00000122289CIL_00024U_0002ENSG00000105887ENST00000393085ENST00000435723ENSG00000164707ENST00000354042ENST00000378428ENST00000422620ENST00000471405ENST00000478310ENST00000480376ENST00000491630ENSG00000189320ENST00000338588ENST00000415751ENST00000435869ENST00000444083ENSG00000199700ENST00000362830ENSG00000224746ENST00000419211CIL_00024U_0003ENSMUSG00000029840ENSMUST00000031866ENSMUSG00000047420ENSMUST00000051176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024U_0001ENSDARG00000055562ENSDART00000077942ENSDART00000130005ENSDARG00000091378ENSDART00000122289CIL_00024U_0002ENSG00000105887ENST00000393085ENST00000435723ENSG00000164707ENST00000354042ENST00000471405ENSG00000189320ENST00000338588ENST00000415751ENST00000435869ENST00000444083ENSG00000199700ENST00000362830ENSG00000224746ENST00000419211CIL_00024U_0003ENSMUSG00000029840ENSMUST00000031866ENSMUSG00000047420ENSMUST00000051176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055562 ENSDART00000077942 N/A N/A N/A 54.008±27.02 N/A N/A 64.782±31.67 10.671±0.00 3.533±0.00 N/A 23.583±0.00 N/A N/A N/A
ENSDART00000130005 N/A N/A N/A 36.468±7.11 N/A N/A 35.028±17.18 29.212±6.19 N/A N/A 3.329±0.00 N/A N/A N/A
ENSDARG00000091378 ENSDART00000122289 N/A N/A N/A 0.636±0.24 N/A N/A 0.915±0.25 1.877±0.00 0.171±0.00 N/A 0.125±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105887 ENST00000393085 35.966±0.00 20.054±0.00 5.864±0.00 41.790±8.36 20.426±6.09 20.190±9.37 12.406±8.06 15.979±8.03 11.386±1.53 27.637±11.92 9.461±5.46 17.035±4.89 20.255±4.48 26.541±7.50
ENST00000435723 N/A N/A 3.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164707 ENST00000354042 N/A N/A N/A 3.929±2.41 N/A N/A N/A N/A N/A N/A N/A N/A 45.335±35.58 4.063±0.00
ENST00000378428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471405 N/A N/A N/A N/A 0.163±0.00 0.228±0.00 N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A
ENST00000478310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189320 ENST00000338588 N/A N/A N/A N/A 0.790±0.38 0.458±0.00 3.012±2.59 N/A 2.210±0.00 1.764±0.00 N/A 0.550±0.17 0.276±0.00 0.102±0.00
ENST00000415751 N/A 0.362±0.00 0.751±0.00 0.056±0.00 0.447±0.00 N/A N/A 1.262±0.00 2.061±0.00 0.756±0.33 0.959±0.00 0.714±0.00 0.086±0.02 N/A
ENST00000435869 N/A N/A 0.212±0.00 N/A N/A 0.637±0.00 N/A N/A 1.004±0.00 N/A N/A N/A 0.075±0.00 0.066±0.00
ENST00000444083 0.900±0.00 0.131±0.00 N/A 0.057±0.00 0.709±0.00 1.151±0.04 N/A 1.928±0.41 N/A N/A 0.499±0.00 0.168±0.00 0.068±0.00 0.917±0.00
ENSG00000199700 ENST00000362830 N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224746 ENST00000419211 N/A N/A 1.733±0.00 0.087±0.00 0.050±0.00 0.029±0.00 0.216±0.00 0.086±0.00 N/A N/A 0.462±0.00 0.049±0.00 0.117±0.07 0.239±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029840 ENSMUST00000031866 26.947±5.15 66.725±3.16 13.355±0.37 13.514±0.91 25.783±8.84 30.055±1.74 8.259±0.71 21.334±4.37 20.830±6.13 31.629±3.25 3.676±1.10 28.835±11.11 20.149±11.43 7.062±3.12
ENSMUSG00000047420 ENSMUST00000051176 0.598±0.28 0.563±0.31 0.867±0.22 0.261±0.29 0.994±0.29 0.234±0.11 0.095±0.04 0.256±0.09 0.068±0.04 0.711±0.25 0.195±0.07 2.417±1.88 0.446±0.44 0.146±0.11

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