C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 180, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444083 FAM180A-001 ENSG00000189320 9606 - 7:135729607-135748619 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000444083
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000444083 0.900±0.00 0.131±0.00 0.057±0.00 0.709±0.00 1.151±0.04 1.928±0.41 0.499±0.00 0.168±0.00 0.068±0.00 0.917±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082N CIL_00082N_0001 VISTA 7:135472160-136074488
CIL_0002H3 CIL_0002H3_0001 CGP 7:135681237-135748846
CIL_00024U CIL_00024U_0002 CGP 7:135728348-135977353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051176 Fam180a-201 protein_coding Mus_musculus 0 427

Loading