C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, beta class I
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196230 TUBB 9606 + 6:30720201-30725426 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327892 TUBB-001 30720201-30725426 protein_coding
  ENST00000330914 TUBB-002 30721574-30725426 protein_coding
  ENST00000396384 TUBB-004 30721699-30725426 protein_coding
  ENST00000396389 TUBB-003 30721667-30725426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327892ENST00000330914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327892 81.290±0.00 131.492±0.00 9.064±0.00 45.496±11.77 64.495±35.28 50.082±23.14 26.814±15.99 57.150±20.81 45.526±11.83 69.893±45.81 31.604±20.28 194.447±102.19 242.115±49.13 63.675±29.02
ENST00000330914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.939±4.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003924 IEA GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005641 IDA nuclear envelope lumen
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0005874 TAS microtubule
GO:0006184 IEA GTP catabolic process
GO:0006928 TAS cellular component movement
GO:0007017 TAS microtubule-based process
GO:0009987 IDA cellular process
GO:0019904 IEA protein domain specific binding
GO:0030705 TAS cytoskeleton-dependent intracellular transport
GO:0032403 IEA protein complex binding
GO:0032794 IEA GTPase activating protein binding
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0042267 NAS natural killer cell mediated cytotoxicity
GO:0042288 IDA MHC class I protein binding
GO:0043234 IEA protein complex
GO:0044297 IDA cell body
GO:0051225 IEA spindle assembly
GO:0051258 IEA protein polymerization
GO:0051301 TAS cell division
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037997 tubb5 tubulin, beta 5 protein_coding Danio_rerio
ENSMUSG00000001525 Tubb5 tubulin, beta 5 class I protein_coding Mus_musculus

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