C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, T type, alpha 1H subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564231 CACNA1H-003 ENSG00000196557 9606 + 16:1210067-1221084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungPlacentaENST00000564231
Transcript ID Adrenal Brain Lung Placenta
ENST00000564231 2.835±0.00 0.640±0.00 0.143±0.00 0.896±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078496 Cacna1h-201 protein_coding Mus_musculus 0 2769
ENSMUST00000159610 Cacna1h-001 protein_coding Mus_musculus 0 2769
ENSMUST00000159048 Cacna1h-002 protein_coding Mus_musculus 0 2348
ENSMUST00000162155 Cacna1i-002 nonsense_mediated_decay Mus_musculus 0 1387
ENSMUST00000160424 Cacna1i-001 protein_coding Mus_musculus 0 1387
ENSMUST00000107785 Cacna1g-006 protein_coding Mus_musculus 0 1229
ENSMUST00000107793 Cacna1g-008 protein_coding Mus_musculus 0 1229
ENSMUST00000107791 Cacna1g-002 protein_coding Mus_musculus 0 1229
ENSMUST00000107788 Cacna1g-009 protein_coding Mus_musculus 0 1197
ENSMUST00000107792 Cacna1g-004 protein_coding Mus_musculus 0 1197
ENSDART00000145615 cacna1i-001 protein_coding Danio_rerio 0 808
ENSDART00000154869 cacna1ha-001 protein_coding Danio_rerio 0 601
ENSDART00000085210 cacna1ha-201 protein_coding Danio_rerio 0 599
ENSMUST00000021234 Cacna1g-201 protein_coding Mus_musculus 0 562
ENSMUST00000107789 Cacna1g-011 protein_coding Mus_musculus 0 562
ENSMUST00000107790 Cacna1g-010 protein_coding Mus_musculus 0 562
ENSMUST00000100561 Cacna1g-005 protein_coding Mus_musculus 0 562
ENSMUST00000103166 Cacna1g-003 protein_coding Mus_musculus 0 562
ENSMUST00000107786 Cacna1g-001 protein_coding Mus_musculus 0 562
ENSDART00000085216 cacna1i-201 protein_coding Danio_rerio 0 544
ENSDART00000151012 si:ch73-379f7.5-001 protein_coding Danio_rerio 0 503
ENSMUST00000161035 Cacna1h-008 protein_coding Mus_musculus 0 484
ENSMUST00000159331 Cacna1h-010 retained_intron Mus_musculus 0 416
ENSMUST00000161658 Cacna1h-009 nonsense_mediated_decay Mus_musculus 0 285

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