C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454175 ZKSCAN5-002 ENSG00000196652 9606 + 7:99505254-99534700 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000454175
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000454175 0.506±0.00 0.603±0.00 0.110±0.00 0.912±0.04 0.856±0.00 0.406±0.10 0.556±0.44 0.373±0.00 0.307±0.11 0.325±0.09 0.903±0.24 0.442±0.06 1.450±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0001 CGP 7:99486519-99534700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085671 Zkscan5-001 protein_coding Mus_musculus 0 760
ENSMUST00000031601 Zkscan5-002 protein_coding Mus_musculus 0 652
ENSMUST00000161896 Zkscan5-003 nonsense_mediated_decay Mus_musculus 0 612
ENSMUST00000062609 Zkscan4-001 protein_coding Mus_musculus 1e-38 167
ENSMUST00000117721 Zkscan3-004 protein_coding Mus_musculus 6e-37 161
ENSMUST00000070785 Zkscan3-003 protein_coding Mus_musculus 6e-37 161
ENSMUST00000116433 Zkscan3-002 protein_coding Mus_musculus 6e-37 161
ENSMUST00000116434 Zkscan3-001 protein_coding Mus_musculus 6e-37 161
ENSMUST00000099720 Zscan12-002 protein_coding Mus_musculus 8e-36 158
ENSMUST00000053293 Zscan12-001 protein_coding Mus_musculus 8e-36 158
ENSMUST00000076238 Gm10065-201 protein_coding Mus_musculus 3e-35 156
ENSMUST00000094116 Zscan25-201 protein_coding Mus_musculus 8e-31 141
ENSMUST00000161881 Zkscan5-005 protein_coding Mus_musculus 1e-28 134
ENSMUST00000110481 Zkscan8-002 protein_coding Mus_musculus 1e-24 121
ENSMUST00000156674 Zkscan8-003 protein_coding Mus_musculus 1e-24 121
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 1e-24 121
ENSMUST00000160162 Zkscan5-006 processed_transcript Mus_musculus 6e-22 111
ENSMUST00000162168 Zkscan5-004 nonsense_mediated_decay Mus_musculus 6e-22 111
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 0.000000000002 81
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000161170 Zfp9-001 protein_coding Mus_musculus 0.00000001 68

Loading