C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 3, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196937 FAM3C 9606 - 7:121348851-121396364 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359943 FAM3C-001 121348851-121396334 protein_coding
  ENST00000412653 FAM3C-002 121360056-121396364 protein_coding
  ENST00000426156 FAM3C-004 121360092-121396308 protein_coding
  ENST00000474082 FAM3C-006 121350383-121351541 retained_intron
  ENST00000497622 FAM3C-005 121362705-121364552 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359943ENST00000412653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359943 5.196±0.00 11.337±0.00 2.398±0.00 16.771±10.80 3.479±1.33 8.959±6.50 4.085±0.00 6.587±5.84 5.866±0.07 9.842±7.88 0.714±0.18 10.276±4.96 16.611±3.18 11.974±6.05
ENST00000412653 N/A N/A 9.280±0.00 N/A N/A N/A N/A N/A 7.674±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R0 CIL_0003R0_0001 CGP 7:121325367-121396364
CIL_0003R1 CIL_0003R1_0001 CGP 7:121348851-122062036

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 NAS cytokine activity
GO:0005576 NAS extracellular region
GO:0005794 IDA Golgi apparatus
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0031410 IEA cytoplasmic vesicle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056152 fam3c family with sequence similarity 3, member C protein_coding Danio_rerio
ENSMUSG00000029672 Fam3c family with sequence similarity 3, member C protein_coding Mus_musculus

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