C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 3, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359943 FAM3C-001 ENSG00000196937 9606 - 7:121348851-121396334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359943
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359943 5.196±0.00 11.337±0.00 2.398±0.00 16.771±10.80 3.479±1.33 8.959±6.50 4.085±0.00 6.587±5.84 5.866±0.07 9.842±7.88 0.714±0.18 10.276±4.96 16.611±3.18 11.974±6.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R0 CIL_0003R0_0001 CGP 7:121325367-121396364
CIL_0003R1 CIL_0003R1_0001 CGP 7:121348851-122062036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 NAS cytokine activity
GO:0005576 NAS extracellular region
GO:0005794 IDA Golgi apparatus
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0031410 IEA cytoplasmic vesicle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165576 Fam3c-001 protein_coding Mus_musculus 0 987
ENSMUST00000163963 Fam3c-003 protein_coding Mus_musculus 0 941
ENSMUST00000081288 Fam3c-002 protein_coding Mus_musculus 0 915
ENSMUST00000164669 Fam3c-005 protein_coding Mus_musculus 0 632
ENSMUST00000163371 Fam3c-006 nonsense_mediated_decay Mus_musculus 0 396
ENSMUST00000168965 Fam3c-004 protein_coding Mus_musculus 0 394

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