C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IC
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197879 MYO1C 9606 - 17:1464098-1492812 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359786 MYO1C-001 1464098-1492812 protein_coding
  ENST00000361007 MYO1C-201 1464188-1491678 protein_coding
  ENST00000438665 MYO1C-010 1464186-1485934 protein_coding
  ENST00000545534 MYO1C-003 1465413-1485367 protein_coding
  ENST00000570490 MYO1C-011 1482533-1484657 protein_coding
  ENST00000570984 MYO1C-007 1480527-1491669 protein_coding
  ENST00000571615 MYO1C-016 1471134-1474931 retained_intron
  ENST00000571715 MYO1C-008 1482900-1487060 protein_coding
  ENST00000571851 MYO1C-012 1479686-1481238 processed_transcript
  ENST00000572615 MYO1C-019 1468790-1470484 retained_intron
  ENST00000573198 MYO1C-013 1478677-1481216 processed_transcript
  ENST00000573853 MYO1C-009 1482489-1486921 protein_coding
  ENST00000573961 MYO1C-015 1477290-1478141 retained_intron
  ENST00000574308 MYO1C-020 1468223-1470219 retained_intron
  ENST00000574341 MYO1C-021 1467491-1468499 retained_intron
  ENST00000574790 MYO1C-005 1482506-1492040 protein_coding
  ENST00000575011 MYO1C-018 1470240-1471108 nonsense_mediated_decay
  ENST00000575158 MYO1C-002 1464186-1486201 protein_coding
  ENST00000575335 MYO1C-006 1482889-1491237 protein_coding
  ENST00000575864 MYO1C-017 1470631-1472355 retained_intron
  ENST00000576822 MYO1C-014 1480607-1481209 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359786ENST00000361007ENST00000438665ENST00000545534ENST00000570984ENST00000574341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359786 N/A N/A N/A N/A 1.849±0.00 N/A 1.582±0.00 N/A N/A N/A N/A 2.385±0.00 N/A N/A
ENST00000361007 105.654±0.00 47.252±0.00 N/A 4.260±0.00 202.707±0.00 34.088±27.63 30.228±0.00 48.864±0.00 8.929±0.00 34.212±28.64 37.252±0.00 12.977±8.23 46.904±15.01 18.977±16.39
ENST00000438665 22.371±0.00 14.765±0.00 N/A N/A 1.516±0.00 15.607±0.00 6.909±5.93 N/A N/A N/A N/A 20.636±14.16 9.752±0.00 7.629±2.30
ENST00000545534 N/A N/A 1.656±0.00 0.484±0.00 N/A N/A N/A N/A 4.041±0.00 5.105±0.00 N/A N/A N/A 3.663±0.00
ENST00000570984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.900±0.00 N/A N/A N/A
ENST00000574341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.063±0.00 107.367±0.00 23.032±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005102 IPI receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005643 IEA nuclear pore
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0005903 IEA brush border
GO:0006200 IEA ATP catabolic process
GO:0006605 IDA protein targeting
GO:0006612 IDA protein targeting to membrane
GO:0006810 IEA transport
GO:0008022 IEA protein C-terminus binding
GO:0008152 IEA metabolic process
GO:0009925 IDA basal plasma membrane
GO:0016020 IDA membrane
GO:0016328 IDA lateral plasma membrane
GO:0016459 IEA myosin complex
GO:0016461 TAS unconventional myosin complex
GO:0030335 IMP positive regulation of cell migration
GO:0030898 IEA actin-dependent ATPase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0031941 IDA filamentous actin
GO:0032420 IEA stereocilium
GO:0038089 IMP positive regulation of cell migration by vascular endothelial growth factor signaling pathway
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0045121 IDA membrane raft
GO:0045160 IEA myosin I complex
GO:0051028 IEA mRNA transport
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0090314 IMP positive regulation of protein targeting to membrane
GO:1900748 IMP positive regulation of vascular endothelial growth factor signaling pathway
GO:2000810 IMP regulation of tight junction assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020924 MYO1C si:ch211-69i14.4 (si:ch211-69i14.4), mRNA protein_coding Danio_rerio
ENSDARG00000061579 myo1c myosin IC protein_coding Danio_rerio
ENSMUSG00000017774 Myo1c myosin IC protein_coding Mus_musculus

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