C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IC
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545534 MYO1C-003 ENSG00000197879 9606 - 17:1465413-1485367 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungTestisENST00000545534
Transcript ID Bladder Brain Liver Lung Testis
ENST00000545534 1.656±0.00 0.484±0.00 4.041±0.00 5.105±0.00 3.663±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108431 Myo1c-004 protein_coding Mus_musculus 0 4096
ENSMUST00000102504 Myo1c-003 protein_coding Mus_musculus 0 4095
ENSMUST00000069057 Myo1c-001 protein_coding Mus_musculus 0 4095
ENSMUST00000102505 Myo1c-002 protein_coding Mus_musculus 0 4093
ENSMUST00000151174 Myo1c-009 retained_intron Mus_musculus 0 2643
ENSMUST00000146419 Myo1c-008 retained_intron Mus_musculus 0 850
ENSMUST00000123064 Myo1c-007 retained_intron Mus_musculus 0 767
ENSMUST00000148659 Myo1c-006 retained_intron Mus_musculus 0 641
ENSMUST00000155027 Myo1c-010 retained_intron Mus_musculus 0 446
ENSDART00000053511 MYO1C-201 protein_coding Danio_rerio 0 268
ENSMUST00000169347 Myo1h-201 protein_coding Mus_musculus 0 211
ENSMUST00000124316 Myo1h-001 protein_coding Mus_musculus 0 211
ENSMUST00000144725 Myo1g-002 nonsense_mediated_decay Mus_musculus 4e-37 161
ENSMUST00000003459 Myo1g-001 protein_coding Mus_musculus 4e-37 161
ENSMUST00000131823 Myo1g-006 retained_intron Mus_musculus 1e-32 147
ENSMUST00000156878 Myo1g-004 retained_intron Mus_musculus 8e-29 134

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