C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198538 ZNF28 9606 - 19:52797409-52857600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339844 ZNF28-006 52801457-52810447 protein_coding
  ENST00000391783 ZNF28-002 52800048-52821669 protein_coding
  ENST00000438150 ZNF28-004 52797409-52806021 protein_coding
  ENST00000457749 ZNF28-001 52797409-52821632 protein_coding
  ENST00000464469 ZNF28-005 52807876-52821633 processed_transcript
  ENST00000542421 ZNF28-007 52814284-52818028 processed_transcript
  ENST00000594602 ZNF28-009 52801381-52857600 protein_coding
  ENST00000596559 ZNF28-010 52801310-52857600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000438150ENST00000457749
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000438150 0.976±0.00 0.234±0.00 0.498±0.03 N/A N/A 0.688±0.00 0.133±0.00 1.718±0.00 0.433±0.22 0.619±0.00 0.765±0.33
ENST00000457749 N/A 0.559±0.00 N/A 1.314±0.00 1.902±0.00 N/A 0.630±0.43 0.561±0.00 1.004±0.57 0.825±0.08 1.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0007 CGP 19:52797409-52857649

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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