C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438150 ZNF28-004 ENSG00000198538 9606 - 19:52797409-52806021 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyLiverLungOvaryPlacentaTestisENST00000438150
Transcript ID Adrenal Bladder Brain Kidney Liver Lung Ovary Placenta Testis
ENST00000438150 0.976±0.00 0.234±0.00 0.498±0.03 0.688±0.00 0.133±0.00 1.718±0.00 0.433±0.22 0.619±0.00 0.765±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0007 CGP 19:52797409-52857649

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088811 Zfp160-201 protein_coding Mus_musculus 0 444
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0 255
ENSMUST00000186264 RP24-392D11.2-001 protein_coding Mus_musculus 8.99999e-40 171
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 8.99999e-40 171
ENSMUST00000065871 Zfp229-201 protein_coding Mus_musculus 5e-37 161
ENSMUST00000182603 Zfp229-001 protein_coding Mus_musculus 5e-37 161
ENSMUST00000165705 Zfp583-201 protein_coding Mus_musculus 7e-36 158
ENSMUST00000108560 Zfp583-002 protein_coding Mus_musculus 7e-36 158
ENSMUST00000062765 Zfp583-001 protein_coding Mus_musculus 7e-36 158
ENSMUST00000007884 Zfp54-001 protein_coding Mus_musculus 2e-27 130
ENSMUST00000165230 Zfp54-002 protein_coding Mus_musculus 2e-27 130
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 1e-23 117
ENSMUST00000039726 3110052M02Rik-201 protein_coding Mus_musculus 2e-21 110
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 9e-20 104
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 9e-20 104
ENSMUST00000019572 Zfp874b-001 protein_coding Mus_musculus 1e-18 100
ENSMUST00000179777 Gm19965-001 protein_coding Mus_musculus 2e-17 97
ENSMUST00000072133 Gm10226-201 protein_coding Mus_musculus 2e-17 97
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 6e-17 95
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 7e-16 92
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 7e-16 92
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 0.000000000000009 88
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 0.000000000000009 88
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 0.000000000000009 88
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0.000000000000009 88
ENSMUST00000078257 D130040H23Rik-201 protein_coding Mus_musculus 0.00000000000003 86
ENSDART00000106571 AL935044.2-201 protein_coding Danio_rerio 0.00000000000003 86
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 0.000000000002 81
ENSMUST00000012314 A530054K11Rik-001 protein_coding Mus_musculus 0.00000000007 75
ENSMUST00000165906 Gm4924-201 protein_coding Mus_musculus 0.0000000003 73
ENSDART00000106530 zgc:171418-201 protein_coding Danio_rerio 0.0000000003 73
ENSDART00000127704 BX005085.2-201 protein_coding Danio_rerio 0.0000000009 71
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 0.000000003 69
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 0.000000003 69
ENSDART00000127914 si:ch211-241n15.3-001 protein_coding Danio_rerio 0.000000003 69
ENSMUST00000110214 Gm6871-001 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000073410 Gm6871-005 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0.0000002 64
ENSDART00000129771 CABZ01011447.1-201 protein_coding Danio_rerio 0.0000002 64
ENSDART00000130228 CR628395.2-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000128449 CU302413.2-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000153833 si:ch211-120c15.3-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000150582 si:ch211-120c15.3-001 protein_coding Danio_rerio 0.0000006 62
ENSDART00000129508 BX321887.1-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000150248 si:dkey-77p23.2-001 protein_coding Danio_rerio 0.0000006 62
ENSDART00000130517 CU138542.4-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000130315 BX510909.3-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000106229 CU694951.2-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000123526 BX664622.1-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000145557 BX469910.1-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000129374 BX936303.1-201 protein_coding Danio_rerio 0.0000006 62
ENSDART00000128694 si:dkey-77p23.3-201 protein_coding Danio_rerio 0.000002 60
ENSDART00000150283 si:dkey-77p23.3-001 protein_coding Danio_rerio 0.000002 60
ENSDART00000122468 CU672268.1-201 protein_coding Danio_rerio 0.000002 60
ENSDART00000101550 zgc:173577-001 protein_coding Danio_rerio 0.000002 60
ENSMUST00000156289 Rgs20-006 retained_intron Mus_musculus 0.00003 57
ENSMUST00000074982 Zfp868-201 protein_coding Mus_musculus 0.00003 57
ENSMUST00000121886 Zfp868-001 protein_coding Mus_musculus 0.00003 57
ENSMUST00000117110 Zfp455-002 protein_coding Mus_musculus 0.00003 57
ENSMUST00000120861 Zfp455-001 protein_coding Mus_musculus 0.00003 57
ENSDART00000106263 zgc:174234-202 protein_coding Danio_rerio 0.00003 57
ENSDART00000101354 zgc:174234-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000106428 zgc:174234-203 protein_coding Danio_rerio 0.00003 57
ENSDART00000106266 si:zfos-44a5.1-001 protein_coding Danio_rerio 0.00003 57
ENSDART00000129130 CABZ01041280.1-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000106448 si:ch1073-186o8.3-001 protein_coding Danio_rerio 0.00003 57
ENSDART00000140848 si:zfos-44a5.2-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000106379 CABZ01066717.2-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000106261 zgc:113443-203 protein_coding Danio_rerio 0.00003 57
ENSDART00000058053 CABZ01075191.1-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000063571 zgc:112958-201 protein_coding Danio_rerio 0.00003 57
ENSDART00000106339 CU929037.1-201 protein_coding Danio_rerio 0.00009 55
ENSDART00000075188 zgc:112399-201 protein_coding Danio_rerio 0.0003 53
ENSDART00000144980 si:dkey-20i20.8-001 protein_coding Danio_rerio 0.0003 53
ENSDART00000106562 CU694951.1-201 protein_coding Danio_rerio 0.0003 53
ENSDART00000058715 zgc:113886-201 protein_coding Danio_rerio 0.0003 53
ENSDART00000127877 zgc:113443-204 protein_coding Danio_rerio 0.0003 53
ENSDART00000081389 zgc:113443-201 protein_coding Danio_rerio 0.0003 53
ENSDART00000106504 zgc:113443-001 protein_coding Danio_rerio 0.0003 53
ENSDART00000075209 zgc:113886-203 protein_coding Danio_rerio 0.0003 53
ENSDART00000051025 zgc:110249-201 protein_coding Danio_rerio 0.0003 53
ENSDART00000138302 zgc:110249-001 protein_coding Danio_rerio 0.0003 53

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