C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SFT2 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198818 SFT2D1 9606 - 6:166319728-166342591 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361731 SFT2D1-002 166319728-166342591 protein_coding
  ENST00000478705 SFT2D1-004 166320156-166342576 processed_transcript
  ENST00000479490 SFT2D1-005 166320028-166324688 processed_transcript
  ENST00000487841 SFT2D1-003 166319860-166342547 processed_transcript
  ENST00000488773 SFT2D1-001 166324361-166331407 processed_transcript
  ENST00000494682 SFT2D1-006 166325873-166328339 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361731ENST00000478705ENST00000479490ENST00000487841ENST00000488773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361731 7.775±0.00 7.757±0.00 1.027±0.00 10.906±2.06 6.822±3.69 7.447±1.09 3.683±1.60 20.125±0.00 4.534±1.45 6.730±3.44 2.923±0.10 14.153±5.37 13.669±7.60 8.354±6.32
ENST00000478705 10.597±0.00 8.828±0.00 N/A 9.379±3.94 8.633±2.69 9.263±0.00 3.827±0.00 7.667±5.32 2.899±0.00 11.277±0.00 1.285±0.00 70.441±0.00 25.201±0.00 11.168±0.51
ENST00000479490 N/A 1.876±0.00 N/A N/A N/A 0.817±0.00 0.156±0.00 N/A N/A 0.503±0.00 0.187±0.00 2.177±0.16 N/A 0.955±0.00
ENST00000487841 N/A N/A N/A N/A N/A N/A N/A N/A 0.424±0.00 0.616±0.00 0.183±0.00 N/A N/A N/A
ENST00000488773 N/A N/A 2.960±0.00 N/A N/A 2.489±0.00 N/A N/A N/A N/A N/A N/A N/A 2.790±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094V CIL_00094V_0001 VISTA 6:166171962-166774036

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007362 sft2d1 SFT2 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000069899 Gm12166 predicted gene 12166 protein_coding Mus_musculus
ENSMUSG00000073468 Sft2d1 SFT2 domain containing 1 protein_coding Mus_musculus

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