C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198874 TYW1 9606 + 7:66995173-67239519 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359626 TYW1-001 66996815-67239514 protein_coding
  ENST00000361660 TYW1-002 66996853-67239512 nonsense_mediated_decay
  ENST00000442959 TYW1-010 66996820-67017881 protein_coding
  ENST00000475392 TYW1-011 66996845-67009749 retained_intron
  ENST00000491969 TYW1-009 66995173-66998855 processed_transcript
  ENST00000495971 TYW1-007 67067138-67238640 retained_intron
  ENST00000615572 TYW1-201 66996820-67239519 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungOvaryPlacentaTestisENST00000359626
Transcript ID Breast Colon Liver Lung Ovary Placenta Testis
ENST00000359626 2.112±0.00 2.486±0.00 1.950±0.00 1.448±0.00 2.183±0.00 3.355±0.00 4.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UR CIL_0005UR_0001 CGP 7:66921225-66995601
CIL_0005US CIL_0005US_0001 CGP 7:66987677-67239519

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005506 IEA iron ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008033 IEA tRNA processing
GO:0010181 IEA FMN binding
GO:0016491 IEA oxidoreductase activity
GO:0016829 IEA lyase activity
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062987 tyw1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000056310 Tyw1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) protein_coding Mus_musculus

Loading