C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359626 TYW1-001 ENSG00000198874 9606 + 7:66996815-67239514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungOvaryPlacentaTestisENST00000359626
Transcript ID Breast Colon Liver Lung Ovary Placenta Testis
ENST00000359626 2.112±0.00 2.486±0.00 1.950±0.00 1.448±0.00 2.183±0.00 3.355±0.00 4.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UR CIL_0005UR_0001 CGP 7:66921225-66995601
CIL_0005US CIL_0005US_0001 CGP 7:66987677-67239519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005506 IEA iron ion binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008033 IEA tRNA processing
GO:0010181 IEA FMN binding
GO:0016491 IEA oxidoreductase activity
GO:0016829 IEA lyase activity
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040213 Tyw1-001 protein_coding Mus_musculus 0 1670
ENSMUST00000121454 Gm12161-001 processed_pseudogene Mus_musculus 0 440

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