C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S18B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204568 MRPS18B 9606 + 6:30617709-30626395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259873 MRPS18B-001 30617709-30626395 protein_coding
  ENST00000472229 MRPS18B-005 30617860-30626395 processed_transcript
  ENST00000472267 MRPS18B-002 30617852-30626395 retained_intron
  ENST00000492316 MRPS18B-004 30617843-30620124 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259873ENST00000472229ENST00000492316
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259873 19.337±0.00 25.375±0.00 3.677±0.00 13.861±8.60 12.237±10.50 10.777±8.23 23.003±19.35 30.711±21.99 21.363±17.99 13.609±9.83 37.349±25.26 24.024±11.32 33.636±6.24 14.764±6.80
ENST00000472229 N/A N/A N/A 2.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.265±0.00 N/A
ENST00000492316 N/A N/A 3.004±0.00 N/A 2.560±0.00 5.686±0.00 4.508±0.00 N/A N/A N/A N/A 4.678±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784
CIL_0001FO CIL_0001FO_0002 CGP 6:30600400-30626395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005763 NAS mitochondrial small ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 NAS:IEA translation
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007065 mrps18b mitochondrial ribosomal protein S18B protein_coding Danio_rerio
ENSMUSG00000024436 Mrps18b mitochondrial ribosomal protein S18B protein_coding Mus_musculus

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