C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S18B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492316 MRPS18B-004 ENSG00000204568 9606 + 6:30617843-30620124 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartOvaryENST00000492316
Transcript ID Bladder Breast Colon Heart Ovary
ENST00000492316 3.004±0.00 2.560±0.00 5.686±0.00 4.508±0.00 4.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784
CIL_0001FO CIL_0001FO_0002 CGP 6:30600400-30626395

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174574 Mrps18b-007 retained_intron Mus_musculus 0 315
ENSMUST00000172642 Mrps18b-004 protein_coding Mus_musculus 0 287
ENSMUST00000174349 Mrps18b-003 protein_coding Mus_musculus 0 287
ENSMUST00000174807 Mrps18b-005 protein_coding Mus_musculus 0 285
ENSMUST00000025305 Mrps18b-001 protein_coding Mus_musculus 0 285
ENSMUST00000173792 Mrps18b-008 processed_transcript Mus_musculus 2e-22 110

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