C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205060 SLC35B4 9606 - 7:134289332-134317051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378509 SLC35B4-001 134289332-134317051 protein_coding
  ENST00000416907 SLC35B4-002 134294552-134316903 nonsense_mediated_decay
  ENST00000466599 SLC35B4-004 134294606-134295177 processed_transcript
  ENST00000470969 SLC35B4-003 134299309-134316897 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378509ENST00000416907ENST00000466599
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378509 2.020±0.00 2.530±0.00 N/A 2.849±1.94 2.338±1.19 0.559±0.00 3.535±0.00 2.761±0.00 0.544±0.00 0.126±0.00 2.463±1.66 4.967±0.96 1.730±0.01
ENST00000416907 N/A N/A 1.536±0.00 N/A N/A 0.526±0.00 N/A 1.647±0.00 0.858±0.00 N/A N/A N/A N/A
ENST00000466599 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GV CIL_0002GV_0001 CGP 7:134127299-134317051
CIL_0002GW CIL_0002GW_0001 CGP 7:134289332-134459284

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005462 IDA UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 IDA UDP-xylose transmembrane transporter activity
GO:0005794 IDA Golgi apparatus
GO:0006111 IEA regulation of gluconeogenesis
GO:0008643 IEA carbohydrate transport
GO:0015788 IDA UDP-N-acetylglucosamine transport
GO:0015790 IDA UDP-xylose transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071087 slc35b4 solute carrier family 35, member B4 protein_coding Danio_rerio
ENSMUSG00000018999 Slc35b4 solute carrier family 35, member B4 protein_coding Mus_musculus

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