C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378509 SLC35B4-001 ENSG00000205060 9606 - 7:134289332-134317051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378509
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378509 2.020±0.00 2.530±0.00 2.849±1.94 2.338±1.19 0.559±0.00 3.535±0.00 2.761±0.00 0.544±0.00 0.126±0.00 2.463±1.66 4.967±0.96 1.730±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GV CIL_0002GV_0001 CGP 7:134127299-134317051
CIL_0002GW CIL_0002GW_0001 CGP 7:134289332-134459284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005462 IDA UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 IDA UDP-xylose transmembrane transporter activity
GO:0005794 IDA Golgi apparatus
GO:0006111 IEA regulation of gluconeogenesis
GO:0008643 IEA carbohydrate transport
GO:0015788 IDA UDP-N-acetylglucosamine transport
GO:0015790 IDA UDP-xylose transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019143 Slc35b4-001 protein_coding Mus_musculus 0 1271
ENSMUST00000138250 Slc35b4-003 nonsense_mediated_decay Mus_musculus 0 706
ENSMUST00000145857 Slc35b4-002 retained_intron Mus_musculus 0 518

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