C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002GV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155530-ENSG00000205060 CGP 9606 7:134127299-134317051
GeneTranscriptPositionBiotype
ENSG00000155530 (LRGUK)
leucine-rich repeats and guanylate kinase domain containing 		ENST00000285928 (LRGUK-001) 134127299-134264591 protein_coding
ENST00000473068 (LRGUK-002) 134127358-134141698 processed_transcript
ENSG00000205060 (SLC35B4)
solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 		ENST00000378509 (SLC35B4-001) 134289332-134317051 protein_coding
ENST00000416907 (SLC35B4-002) 134294552-134316903 nonsense_mediated_decay
ENST00000466599 (SLC35B4-004) 134294606-134295177 processed_transcript
ENST00000470969 (SLC35B4-003) 134299309-134316897 retained_intron
ENSG00000231098 (AC008154.4)
 ENST00000420268 (AC008154.4-001) 134284500-134286055 antisense
CIL_0002GV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056215-ENSMUSG00000018999 CGP 10090 6:34029448-34177111
GeneTranscriptPositionBiotype
ENSMUSG00000018999 (Slc35b4)
solute carrier family 35, member B4 		ENSMUST00000019143 (Slc35b4-001) 34153380-34177111 protein_coding
ENSMUST00000138250 (Slc35b4-003) 34160518-34177082 nonsense_mediated_decay
ENSMUST00000145857 (Slc35b4-002) 34158085-34176970 retained_intron
ENSMUST00000146514 (Slc35b4-004) 34156723-34163482 retained_intron
ENSMUSG00000056215 (Lrguk)
leucine-rich repeats and guanylate kinase domain containing 		ENSMUST00000070189 (Lrguk-001) 34029448-34134034 protein_coding
ENSMUST00000101564 (Lrguk-002) 34029450-34047378 protein_coding
ENSMUST00000141078 (Lrguk-003) 34039308-34047393 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GV_0001ENSG00000155530ENST00000285928ENST00000473068ENSG00000205060ENST00000378509ENST00000416907ENST00000466599ENST00000470969ENSG00000231098ENST00000420268CIL_0002GV_0002ENSMUSG00000018999ENSMUST00000019143ENSMUST00000138250ENSMUST00000145857ENSMUST00000146514ENSMUSG00000056215ENSMUST00000070189ENSMUST00000101564ENSMUST00000141078
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GV_0001ENSG00000155530ENST00000285928ENST00000473068ENSG00000205060ENST00000378509ENST00000416907ENST00000466599ENSG00000231098ENST00000420268CIL_0002GV_0002ENSMUSG00000018999ENSMUST00000019143ENSMUST00000138250ENSMUST00000145857ENSMUST00000146514ENSMUSG00000056215ENSMUST00000070189ENSMUST00000101564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155530 ENST00000285928 0.030±0.00 0.041±0.00 0.106±0.00 0.097±0.00 0.162±0.03 0.054±0.03 0.048±0.04 0.191±0.00 0.044±0.04 0.413±0.00 N/A 0.108±0.10 0.028±0.00 2.055±0.04
ENST00000473068 N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000205060 ENST00000378509 2.020±0.00 2.530±0.00 N/A 2.849±1.94 2.338±1.19 N/A 0.559±0.00 3.535±0.00 2.761±0.00 0.544±0.00 0.126±0.00 2.463±1.66 4.967±0.96 1.730±0.01
ENST00000416907 N/A N/A 1.536±0.00 N/A N/A N/A 0.526±0.00 N/A 1.647±0.00 0.858±0.00 N/A N/A N/A N/A
ENST00000466599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A
ENST00000470969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231098 ENST00000420268 N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018999 ENSMUST00000019143 5.940±2.48 3.411±0.33 2.079±0.19 2.861±1.06 5.863±0.81 3.579±0.32 1.117±0.20 16.032±0.88 2.020±1.45 4.852±0.24 0.217±0.04 4.133±0.76 2.269±0.66 2.005±0.91
ENSMUST00000138250 N/A 5.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145857 N/A 2.058±0.10 N/A 1.505±0.00 N/A 1.309±0.00 0.477±0.02 N/A 0.849±0.00 1.507±0.00 0.340±0.04 2.560±1.03 N/A N/A
ENSMUST00000146514 15.360±4.07 7.068±0.51 4.848±0.00 6.539±2.80 15.097±6.16 6.266±1.10 3.791±0.05 28.500±3.64 4.349±2.26 6.953±1.10 1.491±0.20 9.361±2.40 7.374±2.23 4.904±2.07
ENSMUSG00000056215 ENSMUST00000070189 0.120±0.08 0.071±0.03 0.022±0.00 0.099±0.01 0.012±0.00 0.030±0.00 0.055±0.03 0.147±0.06 0.014±0.01 1.405±0.10 0.014±0.00 1.179±0.31 0.028±0.02 10.121±0.98
ENSMUST00000101564 0.038±0.00 N/A N/A N/A N/A 0.139±0.01 N/A N/A 0.022±0.00 N/A 0.028±0.00 N/A 0.045±0.01 N/A
ENSMUST00000141078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading