C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member B4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018999 Slc35b4 10090 - 6:34153380-34177111 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019143 Slc35b4-001 34153380-34177111 protein_coding
  ENSMUST00000138250 Slc35b4-003 34160518-34177082 nonsense_mediated_decay
  ENSMUST00000145857 Slc35b4-002 34158085-34176970 retained_intron
  ENSMUST00000146514 Slc35b4-004 34156723-34163482 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019143ENSMUST00000138250ENSMUST00000145857ENSMUST00000146514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019143 5.940±2.48 3.411±0.33 2.079±0.19 2.861±1.06 5.863±0.81 3.579±0.32 1.117±0.20 16.032±0.88 2.020±1.45 4.852±0.24 0.217±0.04 4.133±0.76 2.269±0.66 2.005±0.91
ENSMUST00000138250 N/A 5.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145857 N/A 2.058±0.10 N/A 1.505±0.00 N/A 1.309±0.00 0.477±0.02 N/A 0.849±0.00 1.507±0.00 0.340±0.04 2.560±1.03 N/A N/A
ENSMUST00000146514 15.360±4.07 7.068±0.51 4.848±0.00 6.539±2.80 15.097±6.16 6.266±1.10 3.791±0.05 28.500±3.64 4.349±2.26 6.953±1.10 1.491±0.20 9.361±2.40 7.374±2.23 4.904±2.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GV CIL_0002GV_0002 CGP 6:34029448-34177111
CIL_0002GW CIL_0002GW_0002 CGP 6:34153380-34317497

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005462 IEA UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 IEA UDP-xylose transmembrane transporter activity
GO:0005794 IEA Golgi apparatus
GO:0006111 IMP regulation of gluconeogenesis
GO:0008643 IEA carbohydrate transport
GO:0015788 IEA UDP-N-acetylglucosamine transport
GO:0015790 IEA UDP-xylose transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071087 slc35b4 solute carrier family 35, member B4 protein_coding Danio_rerio
ENSG00000205060 SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 protein_coding Homo_sapiens

Loading