C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002GW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205060-ENSG00000085662 CGP 9606 7:134289332-134459284
GeneTranscriptPositionBiotype
ENSG00000085662 (AKR1B1)
aldo-keto reductase family 1, member B1 (aldose reductase) 		ENST00000285930 (AKR1B1-001) 134442350-134459142 protein_coding
ENST00000426422 (AKR1B1-009) 134449719-134459098 nonsense_mediated_decay
ENST00000434222 (AKR1B1-002) 134442386-134459102 nonsense_mediated_decay
ENST00000462784 (AKR1B1-007) 134451294-134459134 retained_intron
ENST00000465351 (AKR1B1-003) 134442387-134459102 retained_intron
ENST00000467251 (AKR1B1-015) 134444727-134448024 retained_intron
ENST00000467829 (AKR1B1-006) 134449685-134459284 retained_intron
ENST00000484592 (AKR1B1-011) 134449578-134459130 retained_intron
ENST00000487438 (AKR1B1-005) 134448997-134459192 processed_transcript
ENST00000489022 (AKR1B1-014) 134449055-134459129 processed_transcript
ENST00000491741 (AKR1B1-004) 134449058-134459284 retained_intron
ENST00000497983 (AKR1B1-013) 134449096-134459252 processed_transcript
ENST00000498373 (AKR1B1-012) 134447956-134449332 retained_intron
ENST00000498771 (AKR1B1-010) 134447850-134451806 retained_intron
ENSG00000205060 (SLC35B4)
solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4 		ENST00000378509 (SLC35B4-001) 134289332-134317051 protein_coding
ENST00000416907 (SLC35B4-002) 134294552-134316903 nonsense_mediated_decay
ENST00000466599 (SLC35B4-004) 134294606-134295177 processed_transcript
ENST00000470969 (SLC35B4-003) 134299309-134316897 retained_intron
ENSG00000229177 (AC008154.5)
 ENST00000453087 (AC008154.5-001) 134346071-134350791 lincRNA
ENSG00000273297 (RP11-38M8.1)
 ENST00000607945 (RP11-38M8.1-001) 134416290-134432431 lincRNA
ENST00000609209 (RP11-38M8.1-003) 134417782-134432416 lincRNA
ENST00000609619 (RP11-38M8.1-002) 134418471-134432453 lincRNA
CIL_0002GW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018999-ENSMUSG00000001642 CGP 10090 6:34153380-34317497
GeneTranscriptPositionBiotype
ENSMUSG00000001642 (Akr1b3)
aldo-keto reductase family 1, member B3 (aldose reductase) 		ENSMUST00000102980 (Akr1b3-001) 34303934-34317497 protein_coding
ENSMUST00000126991 (Akr1b3-004) 34309793-34317430 retained_intron
ENSMUST00000136559 (Akr1b3-003) 34307623-34317441 retained_intron
ENSMUST00000142761 (Akr1b3-005) 34303934-34306687 retained_intron
ENSMUST00000154655 (Akr1b3-002) 34310605-34317459 protein_coding
ENSMUSG00000018999 (Slc35b4)
solute carrier family 35, member B4 		ENSMUST00000019143 (Slc35b4-001) 34153380-34177111 protein_coding
ENSMUST00000138250 (Slc35b4-003) 34160518-34177082 nonsense_mediated_decay
ENSMUST00000145857 (Slc35b4-002) 34158085-34176970 retained_intron
ENSMUST00000146514 (Slc35b4-004) 34156723-34163482 retained_intron
ENSMUSG00000086762 (Gm14546)
predicted gene 14546 		ENSMUST00000138275 (Gm14546-001) 34290265-34324249 antisense
ENSMUSG00000087613 (Gm13855)
predicted gene 13855 		ENSMUST00000145644 (Gm13855-001) 34179232-34186392 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GW_0001ENSG00000085662ENST00000285930ENST00000426422ENST00000434222ENST00000462784ENST00000465351ENST00000467251ENST00000467829ENST00000484592ENST00000487438ENST00000489022ENST00000491741ENST00000497983ENST00000498373ENST00000498771ENSG00000205060ENST00000378509ENST00000416907ENST00000466599ENST00000470969ENSG00000229177ENST00000453087ENSG00000273297ENST00000607945ENST00000609209ENST00000609619CIL_0002GW_0002ENSMUSG00000001642ENSMUST00000102980ENSMUST00000126991ENSMUST00000136559ENSMUST00000142761ENSMUST00000154655ENSMUSG00000018999ENSMUST00000019143ENSMUST00000138250ENSMUST00000145857ENSMUST00000146514ENSMUSG00000086762ENSMUST00000138275ENSMUSG00000087613ENSMUST00000145644
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GW_0001ENSG00000085662ENST00000285930ENST00000434222ENST00000465351ENST00000491741ENST00000498373ENST00000498771ENSG00000205060ENST00000378509ENST00000416907ENST00000466599ENSG00000229177ENST00000453087ENSG00000273297ENST00000607945ENST00000609209ENST00000609619CIL_0002GW_0002ENSMUSG00000001642ENSMUST00000102980ENSMUST00000136559ENSMUST00000142761ENSMUSG00000018999ENSMUST00000019143ENSMUST00000138250ENSMUST00000145857ENSMUST00000146514ENSMUSG00000086762ENSMUST00000138275ENSMUSG00000087613ENSMUST00000145644
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085662 ENST00000285930 37.712±0.00 42.435±0.00 4.560±0.00 24.819±21.61 14.040±11.80 11.606±10.47 33.149±27.34 54.082±53.29 4.821±3.52 25.640±0.00 31.774±21.66 29.662±20.30 133.418±65.13 43.922±10.60
ENST00000426422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434222 N/A N/A N/A N/A N/A 0.603±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465351 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.603±0.00 N/A 4.696±0.00 N/A N/A
ENST00000467251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491741 N/A N/A N/A N/A 0.758±0.00 N/A N/A N/A N/A N/A N/A 1.775±1.15 N/A N/A
ENST00000497983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498373 N/A N/A 5.649±0.00 N/A N/A N/A N/A N/A N/A 5.276±0.00 11.181±0.00 N/A N/A N/A
ENST00000498771 N/A N/A 2.720±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A
ENSG00000205060 ENST00000378509 2.020±0.00 2.530±0.00 N/A 2.849±1.94 2.338±1.19 N/A 0.559±0.00 3.535±0.00 2.761±0.00 0.544±0.00 0.126±0.00 2.463±1.66 4.967±0.96 1.730±0.01
ENST00000416907 N/A N/A 1.536±0.00 N/A N/A N/A 0.526±0.00 N/A 1.647±0.00 0.858±0.00 N/A N/A N/A N/A
ENST00000466599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A
ENST00000470969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229177 ENST00000453087 N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273297 ENST00000607945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 0.117±0.00 N/A
ENST00000609209 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A 0.097±0.05 0.179±0.00 0.201±0.10
ENST00000609619 N/A 0.314±0.00 N/A 0.336±0.16 0.148±0.00 0.203±0.00 0.267±0.00 0.169±0.00 0.192±0.15 0.490±0.00 N/A 0.158±0.11 0.554±0.26 0.362±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001642 ENSMUST00000102980 79.394±13.06 89.909±9.05 358.200±67.52 22.609±11.41 66.346±11.63 39.315±6.15 83.305±10.17 67.555±10.88 12.965±9.25 48.810±2.27 80.534±11.23 74.619±14.18 18.940±11.87 61.303±23.68
ENSMUST00000126991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136559 N/A N/A N/A 0.268±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142761 N/A N/A N/A N/A 24.200±0.00 17.471±1.02 N/A 33.449±0.00 N/A N/A N/A 37.938±2.74 N/A N/A
ENSMUST00000154655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018999 ENSMUST00000019143 5.940±2.48 3.411±0.33 2.079±0.19 2.861±1.06 5.863±0.81 3.579±0.32 1.117±0.20 16.032±0.88 2.020±1.45 4.852±0.24 0.217±0.04 4.133±0.76 2.269±0.66 2.005±0.91
ENSMUST00000138250 N/A 5.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145857 N/A 2.058±0.10 N/A 1.505±0.00 N/A 1.309±0.00 0.477±0.02 N/A 0.849±0.00 1.507±0.00 0.340±0.04 2.560±1.03 N/A N/A
ENSMUST00000146514 15.360±4.07 7.068±0.51 4.848±0.00 6.539±2.80 15.097±6.16 6.266±1.10 3.791±0.05 28.500±3.64 4.349±2.26 6.953±1.10 1.491±0.20 9.361±2.40 7.374±2.23 4.904±2.07
ENSMUSG00000086762 ENSMUST00000138275 N/A N/A 0.028±0.01 0.037±0.02 N/A N/A 0.021±0.01 0.017±0.00 0.015±0.00 0.021±0.00 0.025±0.01 0.184±0.00 N/A 0.091±0.05
ENSMUSG00000087613 ENSMUST00000145644 0.060±0.01 N/A N/A N/A N/A 0.123±0.00 N/A 2.385±0.00 1.227±0.62 0.096±0.00 N/A 0.108±0.00 0.205±0.19 0.726±0.43

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