C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 85C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205476 CCDC85C 9606 - 14:99500180-99604026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380243 CCDC85C-001 99500180-99604026 protein_coding
  ENST00000554877 CCDC85C-004 99515300-99576592 protein_coding
  ENST00000554996 CCDC85C-003 99515200-99580126 protein_coding
  ENST00000555822 CCDC85C-007 99515087-99522945 protein_coding
  ENST00000556348 CCDC85C-005 99516265-99572975 protein_coding
  ENST00000557576 CCDC85C-006 99514961-99536088 protein_coding
  ENST00000557769 CCDC85C-002 99512032-99522563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380243ENST00000557769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380243 1.105±0.00 0.935±0.00 0.277±0.00 0.905±0.79 1.141±0.00 1.105±0.73 0.850±0.73 1.192±0.91 0.735±0.42 3.066±0.00 1.659±0.00 1.703±0.89 1.812±0.37 2.881±1.32
ENST00000557769 N/A N/A 0.812±0.00 2.412±1.37 N/A 7.766±0.00 3.343±2.75 4.481±0.00 5.648±0.00 N/A 0.364±0.00 3.596±0.00 4.320±1.24 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0001 VISTA 14:99273315-99877989
CIL_0003HD CIL_0003HD_0001 CGP 14:99397746-99535044
CIL_0003HE CIL_0003HE_0001 CGP 14:99481169-99604026
CIL_0001A9 CIL_0001A9_0002 CGP 14:99500180-99680569

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005923 IEA tight junction
GO:0021987 ISS cerebral cortex development
GO:0043296 ISS apical junction complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005232 ccdc85ca coiled-coil domain containing 85C, a protein_coding Danio_rerio
ENSDARG00000079555 ccdc85cb coiled-coil domain containing 85C, b protein_coding Danio_rerio
ENSMUSG00000084883 Ccdc85c coiled-coil domain containing 85C protein_coding Mus_musculus

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