C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 85C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380243 CCDC85C-001 ENSG00000205476 9606 - 14:99500180-99604026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380243
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380243 1.105±0.00 0.935±0.00 0.277±0.00 0.905±0.79 1.141±0.00 1.105±0.73 0.850±0.73 1.192±0.91 0.735±0.42 3.066±0.00 1.659±0.00 1.703±0.89 1.812±0.37 2.881±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0001 VISTA 14:99273315-99877989
CIL_0003HD CIL_0003HD_0001 CGP 14:99397746-99535044
CIL_0003HE CIL_0003HE_0001 CGP 14:99481169-99604026
CIL_0001A9 CIL_0001A9_0002 CGP 14:99500180-99680569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005923 IEA tight junction
GO:0021987 ISS cerebral cortex development
GO:0043296 ISS apical junction complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136175 Ccdc85c-201 protein_coding Mus_musculus 0 1712
ENSMUST00000101055 Ccnk-201 protein_coding Mus_musculus 0 749

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