C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: immunity-related GTPase family, M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520549 IRGM-002 ENSG00000237693 9606 + 5:150848497-150900736 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000520549
Transcript ID Brain Testis
ENST00000520549 0.037±0.00 0.319±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151872 Snrk-007 retained_intron Mus_musculus 4e-24 115
ENSMUST00000131169 Snrk-006 retained_intron Mus_musculus 1e-23 113
ENSMUST00000118886 Snrk-003 protein_coding Mus_musculus 1e-23 113
ENSMUST00000134949 Snrk-002 protein_coding Mus_musculus 1e-23 113
ENSMUST00000120173 Snrk-001 protein_coding Mus_musculus 1e-23 113

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