C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 189
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000240849 TMEM189 9606 - 20:50118254-50153734 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371650 TMEM189-002 50123737-50153734 protein_coding
  ENST00000371652 TMEM189-001 50118254-50153734 protein_coding
  ENST00000371656 TMEM189-004 50123770-50131132 protein_coding
  ENST00000371658 TMEM189-006 50124969-50153640 nonsense_mediated_decay
  ENST00000453505 TMEM189-003 50124044-50153734 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000371652ENST00000371656ENST00000453505
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000371652 N/A 2.150±0.60 1.493±0.84 N/A 1.666±0.00 0.693±0.00 1.437±0.00 2.659±0.00 N/A
ENST00000371656 N/A N/A N/A 2.638±0.00 N/A N/A 3.341±0.00 19.366±0.00 22.069±0.00
ENST00000453505 18.091±0.00 18.306±0.00 N/A N/A N/A 17.318±0.00 13.774±0.00 37.310±0.00 29.201±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_0001PF CIL_0001PF_0001 CGP 20:50081124-50153637
CIL_00079R CIL_00079R_0001 CGP 20:50081124-50153734
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007H0 CIL_0007H0_0001 CGP 20:50118254-50192689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042732 tmem189 transmembrane protein 189 protein_coding Danio_rerio
ENSMUSG00000089739 Gm20431 predicted gene 20431 protein_coding Mus_musculus
ENSMUSG00000090213 Tmem189 transmembrane protein 189 protein_coding Mus_musculus

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