C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007H0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000240849-ENSG00000172216 CGP 9606 20:50118254-50192689
GeneTranscriptPositionBiotype
ENSG00000124208 (TMEM189-UBE2V1)
TMEM189-UBE2V1 readthrough 		ENST00000341698 (TMEM189-UBE2V1-001) 50081124-50153637 protein_coding
ENSG00000172216 (CEBPB)
CCAAT/enhancer binding protein (C/EBP), beta 		ENST00000303004 (CEBPB-001) 50190734-50192689 protein_coding
ENSG00000231742 (LINC01273)
long intergenic non-protein coding RNA 1273 		ENST00000411453 (LINC01273-001) 50172590-50176671 lincRNA
ENST00000427333 (LINC01273-002) 50172550-50173370 lincRNA
ENSG00000234698 (RP11-112L6.2)
 ENST00000444478 (RP11-112L6.2-001) 50166362-50169495 lincRNA
ENST00000451960 (RP11-112L6.2-002) 50169346-50171742 lincRNA
ENSG00000237595 (RP11-112L6.3)
 ENST00000435301 (RP11-112L6.3-001) 50163464-50166102 lincRNA
ENST00000615503 (RP11-112L6.3-002) 50162765-50166101 lincRNA
ENSG00000277449 (CEBPB-AS1)
CEBPB antisense RNA 1 		ENST00000613921 (CEBPB-AS1-001) 50184598-50191498 antisense
CIL_0007H0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090213-ENSMUSG00000056501 CGP 10090 2:167642608-167690418
GeneTranscriptPositionBiotype
ENSMUSG00000056501 (Cebpb)
CCAAT/enhancer binding protein (C/EBP), beta 		ENSMUST00000070642 (Cebpb-001) 167688915-167690418 protein_coding
ENSMUSG00000085914 (Gm14320)
predicted gene 14320 		ENSMUST00000137275 (Gm14320-001) 167662109-167667697 antisense
ENSMUSG00000089739 (Gm20431)
predicted gene 20431 		ENSMUST00000125544 (Gm20431-001) 167607850-167661496 protein_coding
ENSMUSG00000090213 (Tmem189)
transmembrane protein 189 		ENSMUST00000006587 (Tmem189-001) 167642608-167661556 protein_coding
ENSMUST00000125874 (Tmem189-003) 167654185-167661554 retained_intron
ENSMUST00000142148 (Tmem189-004) 167643736-167645177 retained_intron
ENSMUST00000148262 (Tmem189-002) 167643228-167689822 processed_transcript
ENSMUSG00000093476 (Gm22355)
predicted gene, 22355 		ENSMUST00000175531 (Gm22355-201) 167644364-167644459 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H0_0001ENSG00000124208ENST00000341698ENSG00000172216ENST00000303004ENSG00000231742ENST00000411453ENST00000427333ENSG00000234698ENST00000444478ENST00000451960ENSG00000237595ENST00000435301ENST00000615503ENSG00000277449ENST00000613921CIL_0007H0_0002ENSMUSG00000056501ENSMUST00000070642ENSMUSG00000085914ENSMUST00000137275ENSMUSG00000089739ENSMUST00000125544ENSMUSG00000090213ENSMUST00000006587ENSMUST00000125874ENSMUST00000142148ENSMUST00000148262ENSMUSG00000093476ENSMUST00000175531
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007H0_0001ENSG00000124208ENST00000341698ENSG00000172216ENST00000303004ENSG00000231742ENST00000411453ENST00000427333ENSG00000234698ENST00000444478ENST00000451960ENSG00000237595ENST00000435301ENST00000615503ENSG00000277449ENST00000613921CIL_0007H0_0002ENSMUSG00000056501ENSMUST00000070642ENSMUSG00000085914ENSMUST00000137275ENSMUSG00000089739ENSMUST00000125544ENSMUSG00000090213ENSMUST00000006587ENSMUST00000142148ENSMUST00000148262ENSMUSG00000093476ENSMUST00000175531
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124208 ENST00000341698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.123±0.00 N/A N/A N/A
ENSG00000172216 ENST00000303004 70.605±0.00 28.999±0.00 0.986±0.00 N/A 5.975±0.00 52.426±0.00 38.960±0.00 34.205±22.73 42.899±37.75 99.147±92.55 114.923±103.82 51.478±32.17 136.782±8.23 8.920±0.00
ENSG00000231742 ENST00000411453 0.029±0.00 0.094±0.00 N/A N/A N/A 0.255±0.00 0.267±0.00 N/A 0.089±0.00 0.173±0.00 N/A 0.243±0.11 0.192±0.16 0.945±0.00
ENST00000427333 0.129±0.00 0.320±0.00 N/A 0.466±0.00 0.391±0.00 1.842±0.00 1.216±0.00 0.427±0.00 0.374±0.00 0.933±0.00 0.040±0.00 0.286±0.22 0.359±0.11 0.972±0.00
ENSG00000234698 ENST00000444478 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00
ENST00000451960 N/A 0.052±0.00 N/A 0.056±0.00 0.107±0.00 N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A
ENSG00000237595 ENST00000435301 0.024±0.00 0.026±0.00 N/A 0.081±0.03 0.138±0.00 0.161±0.11 0.438±0.34 N/A 0.047±0.00 N/A 0.114±0.00 0.052±0.00 0.064±0.01 0.462±0.17
ENST00000615503 N/A N/A N/A 0.165±0.00 N/A 0.148±0.00 N/A N/A 0.309±0.00 N/A N/A 0.096±0.00 N/A 0.517±0.13
ENSG00000277449 ENST00000613921 N/A N/A 0.076±0.00 0.623±0.41 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056501 ENSMUST00000070642 77.953±12.64 648.892±132.21 57.335±12.43 N/A 123.757±39.64 55.476±6.46 30.419±11.30 59.313±0.00 51.287±19.04 158.914±45.32 33.377±7.80 274.296±40.37 142.999±73.14 N/A
ENSMUSG00000085914 ENSMUST00000137275 0.635±0.34 0.569±0.11 N/A 0.148±0.14 0.573±0.26 0.306±0.12 0.057±0.02 0.595±0.38 0.072±0.04 0.232±0.07 0.063±0.03 0.462±0.33 0.115±0.09 4.666±2.56
ENSMUSG00000089739 ENSMUST00000125544 27.515±8.87 N/A N/A 7.596±0.34 33.663±13.71 28.064±4.76 13.135±1.23 45.383±13.03 N/A 22.689±0.00 N/A N/A 29.309±0.00 32.330±2.22
ENSMUSG00000090213 ENSMUST00000006587 46.600±11.65 N/A 18.425±2.89 11.923±1.27 56.425±28.48 78.183±18.09 14.511±2.61 145.198±29.00 13.094±2.52 59.198±16.88 10.052±2.81 43.829±22.08 34.625±9.67 40.055±6.15
ENSMUST00000125874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.354±0.00
ENSMUST00000148262 27.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.772±0.00 13.376±0.00
ENSMUSG00000093476 ENSMUST00000175531 N/A N/A 612.546±0.00 N/A N/A N/A N/A N/A 331.168±0.00 N/A N/A 30.074±0.00 N/A N/A

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