C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 189
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090213 Tmem189 10090 - 2:167642608-167689822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006587 Tmem189-001 167642608-167661556 protein_coding
  ENSMUST00000125874 Tmem189-003 167654185-167661554 retained_intron
  ENSMUST00000142148 Tmem189-004 167643736-167645177 retained_intron
  ENSMUST00000148262 Tmem189-002 167643228-167689822 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006587ENSMUST00000142148ENSMUST00000148262
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006587 46.600±11.65 18.425±2.89 11.923±1.27 56.425±28.48 78.183±18.09 14.511±2.61 145.198±29.00 13.094±2.52 59.198±16.88 10.052±2.81 43.829±22.08 34.625±9.67 40.055±6.15
ENSMUST00000142148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.354±0.00
ENSMUST00000148262 27.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.772±0.00 13.376±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0001PF CIL_0001PF_0002 CGP 2:167607638-167661496
CIL_00079R CIL_00079R_0002 CGP 2:167607850-167689822
CIL_0007H0 CIL_0007H0_0002 CGP 2:167642608-167690418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042732 tmem189 transmembrane protein 189 protein_coding Danio_rerio
ENSG00000124208 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough protein_coding Homo_sapiens
ENSG00000240849 TMEM189 transmembrane protein 189 protein_coding Homo_sapiens

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