C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 189
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371652 TMEM189-001 ENSG00000240849 9606 - 20:50118254-50153734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMuscleOvaryENST00000371652
Transcript ID Breast Colon Liver Lung Muscle Ovary
ENST00000371652 2.150±0.60 1.493±0.84 1.666±0.00 0.693±0.00 1.437±0.00 2.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_0001PF CIL_0001PF_0001 CGP 20:50081124-50153637
CIL_00079R CIL_00079R_0001 CGP 20:50081124-50153734
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007H0 CIL_0007H0_0001 CGP 20:50118254-50192689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006587 Tmem189-001 protein_coding Mus_musculus 0 1133
ENSMUST00000148262 Tmem189-002 processed_transcript Mus_musculus 0 987
ENSMUST00000125544 Gm20431-001 protein_coding Mus_musculus 0 832
ENSMUST00000142148 Tmem189-004 retained_intron Mus_musculus 0 525

Loading