C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124208-ENSG00000240849 CGP 9606 20:50081124-50153734
GeneTranscriptPositionBiotype
ENSG00000124208 (TMEM189-UBE2V1)
TMEM189-UBE2V1 readthrough 		ENST00000341698 (TMEM189-UBE2V1-001) 50081124-50153637 protein_coding
CIL_00079R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000089739-ENSMUSG00000090213 CGP 10090 2:167607850-167689822
GeneTranscriptPositionBiotype
ENSMUSG00000056501 (Cebpb)
CCAAT/enhancer binding protein (C/EBP), beta 		ENSMUST00000070642 (Cebpb-001) 167688915-167690418 protein_coding
ENSMUSG00000077999 (Gm23135)
predicted gene, 23135 		ENSMUST00000104806 (Gm23135-201) 167626315-167626403 miRNA
ENSMUSG00000078923 (Ube2v1)
ubiquitin-conjugating enzyme E2 variant 1 		ENSMUST00000060645 (Ube2v1-003) 167607844-167631972 protein_coding
ENSMUST00000109207 (Ube2v1-001) 167607638-167632095 protein_coding
ENSMUST00000130284 (Ube2v1-004) 167608935-167631967 processed_transcript
ENSMUST00000140216 (Ube2v1-005) 167610308-167631979 protein_coding
ENSMUST00000144628 (Ube2v1-007) 167608946-167610648 retained_intron
ENSMUST00000144830 (Ube2v1-006) 167617588-167631982 retained_intron
ENSMUST00000151365 (Ube2v1-002) 167608766-167631987 protein_coding
ENSMUSG00000085914 (Gm14320)
predicted gene 14320 		ENSMUST00000137275 (Gm14320-001) 167662109-167667697 antisense
ENSMUSG00000089739 (Gm20431)
predicted gene 20431 		ENSMUST00000125544 (Gm20431-001) 167607850-167661496 protein_coding
ENSMUSG00000090213 (Tmem189)
transmembrane protein 189 		ENSMUST00000006587 (Tmem189-001) 167642608-167661556 protein_coding
ENSMUST00000125874 (Tmem189-003) 167654185-167661554 retained_intron
ENSMUST00000142148 (Tmem189-004) 167643736-167645177 retained_intron
ENSMUST00000148262 (Tmem189-002) 167643228-167689822 processed_transcript
ENSMUSG00000093476 (Gm22355)
predicted gene, 22355 		ENSMUST00000175531 (Gm22355-201) 167644364-167644459 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079R_0001ENSG00000124208ENST00000341698CIL_00079R_0002ENSMUSG00000056501ENSMUST00000070642ENSMUSG00000077999ENSMUST00000104806ENSMUSG00000078923ENSMUST00000060645ENSMUST00000109207ENSMUST00000130284ENSMUST00000140216ENSMUST00000144628ENSMUST00000144830ENSMUST00000151365ENSMUSG00000085914ENSMUST00000137275ENSMUSG00000089739ENSMUST00000125544ENSMUSG00000090213ENSMUST00000006587ENSMUST00000125874ENSMUST00000142148ENSMUST00000148262ENSMUSG00000093476ENSMUST00000175531
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079R_0001ENSG00000124208ENST00000341698CIL_00079R_0002ENSMUSG00000056501ENSMUST00000070642ENSMUSG00000077999ENSMUST00000104806ENSMUSG00000078923ENSMUST00000060645ENSMUST00000109207ENSMUST00000144830ENSMUST00000151365ENSMUSG00000085914ENSMUST00000137275ENSMUSG00000089739ENSMUST00000125544ENSMUSG00000090213ENSMUST00000006587ENSMUST00000142148ENSMUST00000148262ENSMUSG00000093476ENSMUST00000175531
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124208 ENST00000341698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.123±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000056501 ENSMUST00000070642 77.953±12.64 648.892±132.21 57.335±12.43 N/A 123.757±39.64 55.476±6.46 30.419±11.30 59.313±0.00 51.287±19.04 158.914±45.32 33.377±7.80 274.296±40.37 142.999±73.14 N/A
ENSMUSG00000077999 ENSMUST00000104806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15032.900±0.00 85.104±0.00 N/A
ENSMUSG00000078923 ENSMUST00000060645 N/A N/A 23.128±0.00 22.287±1.43 N/A 53.957±0.00 13.217±4.92 N/A 27.080±12.06 N/A 22.949±4.51 27.377±1.76 50.479±15.04 N/A
ENSMUST00000109207 19.771±0.09 N/A 40.448±2.24 42.141±15.42 N/A 38.584±5.38 12.305±2.54 32.465±0.00 40.014±12.85 31.214±5.32 35.727±8.55 23.368±7.27 41.439±8.53 7.988±0.00
ENSMUST00000130284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.829±0.00
ENSMUST00000151365 N/A N/A N/A N/A 17.853±0.00 N/A N/A N/A N/A N/A N/A 29.162±1.99 N/A N/A
ENSMUSG00000085914 ENSMUST00000137275 0.635±0.34 0.569±0.11 N/A 0.148±0.14 0.573±0.26 0.306±0.12 0.057±0.02 0.595±0.38 0.072±0.04 0.232±0.07 0.063±0.03 0.462±0.33 0.115±0.09 4.666±2.56
ENSMUSG00000089739 ENSMUST00000125544 27.515±8.87 N/A N/A 7.596±0.34 33.663±13.71 28.064±4.76 13.135±1.23 45.383±13.03 N/A 22.689±0.00 N/A N/A 29.309±0.00 32.330±2.22
ENSMUSG00000090213 ENSMUST00000006587 46.600±11.65 N/A 18.425±2.89 11.923±1.27 56.425±28.48 78.183±18.09 14.511±2.61 145.198±29.00 13.094±2.52 59.198±16.88 10.052±2.81 43.829±22.08 34.625±9.67 40.055±6.15
ENSMUST00000125874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.354±0.00
ENSMUST00000148262 27.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.772±0.00 13.376±0.00
ENSMUSG00000093476 ENSMUST00000175531 N/A N/A 612.546±0.00 N/A N/A N/A N/A N/A 331.168±0.00 N/A N/A 30.074±0.00 N/A N/A

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