C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retrotransposon gag domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243978 RGAG1 9606 + X:110358816-110456334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000465301 RGAG1-001 110419057-110456334 protein_coding
  ENST00000520821 RGAG1-003 110358816-110450881 protein_coding
  ENST00000540313 RGAG1-201 110450565-110456326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000465301ENST00000540313
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000465301 N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A 0.604±0.00 N/A N/A
ENST00000540313 0.020±0.00 0.157±0.05 0.033±0.00 0.013±0.01 0.094±0.00 0.009±0.00 0.060±0.00 0.026±0.00 0.197±0.12 0.281±0.01 2.177±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Y CIL_00079Y_0001 CGP X:110002631-110440233
CIL_00079X CIL_00079X_0001 CGP X:110194186-110456334
CIL_00079W CIL_00079W_0001 CGP X:110358816-110795819

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000085584 Rgag1 retrotransposon gag domain containing 1 protein_coding Mus_musculus

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