C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 578
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000258405 ZNF578 9606 + 19:52453576-52512154 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000421239 ZNF578-001 52453576-52512154 protein_coding
  ENST00000594118 ZNF578-002 52453580-52458507 processed_transcript
  ENST00000596382 ZNF578-005 52453582-52458836 processed_transcript
  ENST00000596674 ZNF578-004 52453613-52458154 processed_transcript
  ENST00000601120 ZNF578-006 52492830-52511142 protein_coding
  ENST00000602221 ZNF578-003 52453594-52458286 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421239ENST00000594118ENST00000596382ENST00000596674ENST00000601120ENST00000602221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421239 0.059±0.00 0.061±0.00 0.100±0.00 0.199±0.03 0.101±0.01 0.121±0.07 0.083±0.06 0.107±0.00 N/A 0.077±0.00 N/A 0.165±0.10 0.041±0.01 0.777±0.28
ENST00000594118 N/A N/A N/A N/A N/A 0.392±0.00 N/A 0.148±0.00 N/A 0.659±0.00 0.040±0.00 1.113±0.62 0.451±0.00 N/A
ENST00000596382 N/A 0.056±0.00 N/A 0.058±0.02 0.058±0.00 N/A 0.014±0.00 0.055±0.00 N/A 0.047±0.03 0.021±0.02 0.055±0.03 0.010±0.00 0.278±0.00
ENST00000596674 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601120 0.251±0.00 0.281±0.00 0.177±0.00 0.347±0.00 0.868±0.00 0.190±0.09 0.151±0.00 0.212±0.00 2.212±0.00 0.552±0.00 N/A 0.412±0.18 0.208±0.16 2.468±1.02
ENST00000602221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0008 CGP 19:52429187-52512154
CIL_0004HA CIL_0004HA_0002 CGP 19:52453576-52564464

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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