C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203326-ENSG00000203326 CGP 9606 19:53330675-53392217
GeneTranscriptPositionBiotype
ENSG00000196417 (ZNF765)
zinc finger protein 765 		ENST00000396408 (ZNF765-001) 53395150-53412007 protein_coding
ENST00000504146 (ZNF765-006) 53389793-53423097 processed_transcript
ENST00000504235 (ZNF765-004) 53395144-53427321 nonsense_mediated_decay
ENST00000505866 (ZNF765-002) 53395161-53408098 protein_coding
ENST00000507045 (ZNF765-005) 53395155-53425568 nonsense_mediated_decay
ENST00000594030 (ZNF765-009) 53395173-53430413 protein_coding
ENST00000594627 (ZNF765-008) 53423320-53426888 processed_transcript
ENST00000596086 (ZNF765-007) 53423375-53427155 processed_transcript
ENSG00000203326 (ZNF525)
zinc finger protein 525 		ENST00000467003 (ZNF525-001) 53365707-53386593 protein_coding
ENST00000474037 (ZNF525-002) 53365693-53384335 protein_coding
ENST00000475179 (ZNF525-003) 53365713-53386581 protein_coding
ENST00000491101 (ZNF525-005) 53365704-53376442 protein_coding
ENST00000497729 (ZNF525-004) 53365693-53376157 retained_intron
ENST00000593918 (ZNF525-008) 53365729-53392217 protein_coding
ENST00000600148 (ZNF525-006) 53379381-53381049 processed_transcript
ENST00000601790 (ZNF525-007) 53383923-53385231 processed_transcript
ENST00000624073 (ZNF525-201) 53330675-53386388 protein_coding
ENSG00000213799 (ZNF845)
zinc finger protein 845 		ENST00000458035 (ZNF845-201) 53333749-53354869 protein_coding
ENST00000595091 (ZNF845-001) 53333749-53354546 protein_coding
ENST00000601857 (ZNF845-004) 53333749-53351084 protein_coding

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CIL_0004HA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258405-ENSG00000198482 CGP 9606 19:52453576-52564464
GeneTranscriptPositionBiotype
ENSG00000167562 (ZNF701)
zinc finger protein 701 		ENST00000301093 (ZNF701-002) 52570301-52584436 protein_coding
ENST00000391785 (ZNF701-001) 52570275-52584566 protein_coding
ENST00000478039 (ZNF701-005) 52555822-52574130 processed_transcript
ENST00000540331 (ZNF701-201) 52570664-52587174 protein_coding
ENST00000593941 (ZNF701-003) 52570664-52582499 protein_coding
ENST00000596514 (ZNF701-004) 52570273-52582276 protein_coding
ENSG00000198482 (ZNF808)
zinc finger protein 808 		ENST00000359798 (ZNF808-001) 52527653-52556336 protein_coding
ENST00000461321 (ZNF808-006) 52535985-52553436 protein_coding
ENST00000461779 (ZNF808-005) 52527709-52553166 protein_coding
ENST00000465448 (ZNF808-004) 52527663-52553456 protein_coding
ENST00000486474 (ZNF808-007) 52527668-52553431 protein_coding
ENST00000487863 (ZNF808-002) 52527652-52564464 nonsense_mediated_decay
ENST00000611267 (ZNF808-201) 52555457-52556760 protein_coding
ENSG00000258405 (ZNF578)
zinc finger protein 578 		ENST00000421239 (ZNF578-001) 52453576-52512154 protein_coding
ENST00000594118 (ZNF578-002) 52453580-52458507 processed_transcript
ENST00000596382 (ZNF578-005) 52453582-52458836 processed_transcript
ENST00000596674 (ZNF578-004) 52453613-52458154 processed_transcript
ENST00000601120 (ZNF578-006) 52492830-52511142 protein_coding
ENST00000602221 (ZNF578-003) 52453594-52458286 processed_transcript
ENSG00000269349 (CTD-3099C6.5)
 ENST00000599143 (CTD-3099C6.5-001) 52511282-52512342 antisense
ENSG00000278543 (CTD-3018O17.6)
 ENST00000613083 (CTD-3018O17.6-001) 52473336-52475239 unprocessed_pseudogene

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CIL_0004HA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023882-ENSMUSG00000023892 CGP 10090 17:21423227-21465591
GeneTranscriptPositionBiotype
ENSMUSG00000023882 (Zfp54)
zinc finger protein 54 		ENSMUST00000007884 (Zfp54-001) 21423233-21435154 protein_coding
ENSMUST00000165230 (Zfp54-002) 21423227-21435640 protein_coding
ENSMUST00000167749 (Zfp54-003) 21423258-21433945 protein_coding
ENSMUSG00000023892 (Zfp51)
zinc finger protein 51 		ENSMUST00000039577 (Zfp51-201) 21450352-21465591 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0004HA_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078503-ENSMUSG00000078502 CGP 10090 4:145510759-145625345
GeneTranscriptPositionBiotype
ENSMUSG00000078502 (Gm13212)
predicted gene 13212 		ENSMUST00000097794 (Gm13212-201) 145617146-145623215 protein_coding
ENSMUST00000105739 (Gm13212-001) 145585166-145625345 protein_coding
ENSMUST00000119718 (Gm13212-002) 145585203-145625341 protein_coding
ENSMUSG00000078503 (Gm13225)
predicted gene 13225 		ENSMUST00000105741 (Gm13225-002) 145514884-145539188 protein_coding
ENSMUST00000105742 (Gm13225-003) 145510759-145539188 protein_coding
ENSMUST00000128939 (Gm13225-004) 145510777-145511836 processed_transcript
ENSMUST00000136309 (Gm13225-001) 145510791-145534919 protein_coding
ENSMUSG00000082352 (Gm13228)
predicted gene 13228 		ENSMUST00000118937 (Gm13228-001) 145574528-145575161 processed_pseudogene
ENSMUSG00000083454 (Gm13226)
predicted gene 13226 		ENSMUST00000117838 (Gm13226-001) 145576889-145577292 processed_pseudogene
ENSMUSG00000096864 (Gm21978)
predicted gene 21978 		ENSMUST00000179696 (Gm21978-001) 145560513-145560889 unprocessed_pseudogene
ENSMUSG00000097661 (Gm26763)
predicted gene, 26763 		ENSMUST00000180968 (Gm26763-201) 145601963-145711968 lincRNA

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HA_0001ENSG00000196417ENST00000396408ENST00000504146ENST00000504235ENST00000505866ENST00000507045ENST00000594030ENST00000594627ENST00000596086ENSG00000203326ENST00000467003ENST00000474037ENST00000475179ENST00000491101ENST00000497729ENST00000593918ENST00000600148ENST00000601790ENST00000624073ENSG00000213799ENST00000458035ENST00000595091ENST00000601857CIL_0004HA_0002ENSG00000167562ENST00000301093ENST00000391785ENST00000478039ENST00000540331ENST00000593941ENST00000596514ENSG00000198482ENST00000359798ENST00000461321ENST00000461779ENST00000465448ENST00000486474ENST00000487863ENST00000611267ENSG00000258405ENST00000421239ENST00000594118ENST00000596382ENST00000596674ENST00000601120ENST00000602221ENSG00000269349ENST00000599143ENSG00000278543ENST00000613083CIL_0004HA_0003ENSMUSG00000023882ENSMUST00000007884ENSMUST00000165230ENSMUST00000167749ENSMUSG00000023892ENSMUST00000039577CIL_0004HA_0004ENSMUSG00000078502ENSMUST00000097794ENSMUST00000105739ENSMUST00000119718ENSMUSG00000078503ENSMUST00000105741ENSMUST00000105742ENSMUST00000128939ENSMUST00000136309ENSMUSG00000082352ENSMUST00000118937ENSMUSG00000083454ENSMUST00000117838ENSMUSG00000096864ENSMUST00000179696ENSMUSG00000097661ENSMUST00000180968
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HA_0001ENSG00000196417ENST00000396408ENST00000504235ENST00000507045ENST00000594030ENSG00000203326ENST00000467003ENST00000474037ENST00000475179ENST00000593918ENST00000624073ENSG00000213799ENST00000458035ENST00000595091ENST00000601857CIL_0004HA_0002ENSG00000167562ENST00000301093ENST00000391785ENST00000540331ENSG00000198482ENST00000359798ENST00000487863ENST00000611267ENSG00000258405ENST00000421239ENST00000594118ENST00000596382ENST00000596674ENST00000601120ENST00000602221ENSG00000269349ENST00000599143ENSG00000278543ENST00000613083CIL_0004HA_0003ENSMUSG00000023882ENSMUST00000007884ENSMUST00000165230ENSMUST00000167749ENSMUSG00000023892ENSMUST00000039577CIL_0004HA_0004ENSMUSG00000078502ENSMUST00000097794ENSMUST00000105739ENSMUST00000119718ENSMUSG00000078503ENSMUST00000105741ENSMUST00000105742ENSMUST00000136309ENSMUSG00000082352ENSMUST00000118937ENSMUSG00000083454ENSMUST00000117838ENSMUSG00000096864ENSMUST00000179696ENSMUSG00000097661ENSMUST00000180968
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196417 ENST00000396408 0.678±0.00 1.282±0.00 0.256±0.00 0.438±0.00 1.335±0.46 0.471±0.19 0.485±0.00 1.032±0.51 N/A 0.301±0.06 N/A 0.858±0.43 0.635±0.08 0.646±0.00
ENST00000504146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504235 N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A 0.519±0.13 N/A
ENST00000505866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507045 N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A N/A N/A N/A
ENST00000594030 0.167±0.00 0.805±0.00 0.051±0.00 N/A 0.326±0.00 0.154±0.01 0.087±0.07 0.175±0.00 0.116±0.00 0.141±0.00 0.045±0.01 0.455±0.10 0.158±0.00 0.561±0.16
ENST00000594627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000203326 ENST00000467003 0.207±0.00 0.411±0.00 N/A 0.140±0.00 0.270±0.00 0.399±0.00 0.096±0.05 0.934±0.00 0.093±0.00 0.319±0.00 N/A 0.406±0.15 0.212±0.15 0.705±0.00
ENST00000474037 N/A N/A 0.609±0.00 0.431±0.00 N/A 0.411±0.00 0.225±0.15 0.277±0.00 1.882±0.00 1.832±0.00 0.016±0.00 0.312±0.00 0.074±0.00 0.289±0.00
ENST00000475179 N/A 1.507±0.00 0.253±0.00 0.173±0.00 0.471±0.00 0.749±0.00 0.185±0.00 0.932±0.00 0.176±0.00 0.459±0.00 N/A 1.079±0.33 0.910±0.59 1.435±0.30
ENST00000491101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593918 N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A 0.568±0.00 N/A
ENST00000600148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624073 33.300±0.00 38.199±0.00 N/A 8.396±0.00 17.115±0.00 42.993±0.00 9.252±0.00 N/A 13.700±0.00 32.108±0.00 18.716±0.00 N/A N/A 20.244±0.00
ENSG00000213799 ENST00000458035 0.104±0.00 1.112±0.00 N/A 0.154±0.00 1.009±0.57 0.501±0.00 0.252±0.17 0.543±0.00 0.154±0.00 0.241±0.00 0.169±0.00 0.319±0.13 0.328±0.13 0.735±0.31
ENST00000595091 0.815±0.00 0.726±0.00 0.629±0.00 0.578±0.25 0.607±0.00 0.638±0.19 0.350±0.23 0.630±0.06 0.693±0.44 1.067±0.68 0.068±0.00 0.587±0.24 0.143±0.06 0.267±0.00
ENST00000601857 N/A N/A N/A N/A 1.928±0.00 2.758±0.00 0.671±0.00 N/A N/A N/A 0.720±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167562 ENST00000301093 N/A N/A 1.260±0.00 N/A N/A N/A 0.840±0.00 N/A 0.131±0.00 N/A 0.302±0.00 N/A 0.326±0.00 N/A
ENST00000391785 0.679±0.00 1.048±0.00 N/A 0.495±0.11 1.789±1.08 1.384±0.36 N/A N/A 1.485±0.00 2.643±0.00 N/A 0.958±0.07 0.510±0.06 N/A
ENST00000478039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540331 0.403±0.00 0.528±0.00 N/A 0.267±0.00 0.667±0.33 0.327±0.00 N/A 1.025±0.00 N/A 0.413±0.00 N/A 0.424±0.05 1.090±0.00 0.512±0.00
ENST00000593941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198482 ENST00000359798 N/A N/A 1.339±0.00 0.481±0.00 2.443±0.00 2.276±0.00 1.216±0.00 N/A N/A 3.716±0.00 1.495±0.00 N/A N/A N/A
ENST00000461321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487863 N/A N/A N/A 0.484±0.00 1.060±0.00 1.291±0.17 0.952±0.24 2.341±0.00 0.199±0.00 1.145±0.00 0.534±0.06 0.774±0.34 0.428±0.00 0.950±0.00
ENST00000611267 N/A 1.852±0.00 N/A N/A 1.636±0.00 N/A 1.849±0.00 N/A 0.384±0.00 N/A 0.675±0.00 N/A 0.895±0.00 2.690±0.00
ENSG00000258405 ENST00000421239 0.059±0.00 0.061±0.00 0.100±0.00 0.199±0.03 0.101±0.01 0.121±0.07 0.083±0.06 0.107±0.00 N/A 0.077±0.00 N/A 0.165±0.10 0.041±0.01 0.777±0.28
ENST00000594118 N/A N/A N/A N/A N/A 0.392±0.00 N/A 0.148±0.00 N/A 0.659±0.00 0.040±0.00 1.113±0.62 0.451±0.00 N/A
ENST00000596382 N/A 0.056±0.00 N/A 0.058±0.02 0.058±0.00 N/A 0.014±0.00 0.055±0.00 N/A 0.047±0.03 0.021±0.02 0.055±0.03 0.010±0.00 0.278±0.00
ENST00000596674 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601120 0.251±0.00 0.281±0.00 0.177±0.00 0.347±0.00 0.868±0.00 0.190±0.09 0.151±0.00 0.212±0.00 2.212±0.00 0.552±0.00 N/A 0.412±0.18 0.208±0.16 2.468±1.02
ENST00000602221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 N/A N/A
ENSG00000269349 ENST00000599143 0.203±0.00 0.221±0.00 N/A 0.242±0.00 0.389±0.00 0.269±0.00 0.462±0.30 0.136±0.00 0.010±0.00 0.225±0.00 N/A 0.275±0.06 0.181±0.04 1.591±0.27
ENSG00000278543 ENST00000613083 N/A N/A N/A 0.024±0.01 0.014±0.00 N/A 0.007±0.00 0.019±0.00 0.200±0.00 N/A 0.026±0.00 0.021±0.01 N/A 0.033±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023882 ENSMUST00000007884 0.454±0.13 0.262±0.15 2.955±0.83 0.500±0.26 0.339±0.15 0.553±0.19 0.120±0.04 0.389±0.08 0.621±0.50 0.413±0.08 0.355±0.09 0.725±0.77 1.558±0.70 1.139±0.09
ENSMUST00000165230 N/A N/A 0.235±0.02 0.147±0.00 0.146±0.05 0.545±0.00 0.069±0.03 0.106±0.00 0.216±0.10 0.302±0.00 0.069±0.04 N/A 0.130±0.00 N/A
ENSMUST00000167749 0.533±0.17 0.590±0.00 N/A 0.790±0.00 0.339±0.05 0.507±0.20 0.146±0.07 0.285±0.10 0.313±0.13 0.537±0.20 0.226±0.00 0.782±0.52 1.180±0.60 1.604±0.93
ENSMUSG00000023892 ENSMUST00000039577 1.005±0.26 0.253±0.13 4.643±1.30 3.417±2.50 0.709±0.20 0.787±0.17 0.847±0.37 0.567±0.12 1.665±1.47 1.159±0.15 2.508±0.22 1.451±1.24 2.287±1.01 1.744±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000078502 ENSMUST00000097794 0.102±0.00 N/A N/A N/A N/A N/A 0.052±0.02 N/A 0.123±0.00 0.137±0.06 N/A 0.380±0.15 0.337±0.26 N/A
ENSMUST00000105739 0.143±0.08 N/A 0.229±0.03 0.077±0.03 0.181±0.02 N/A 0.119±0.11 0.079±0.00 0.266±0.12 0.115±0.09 0.054±0.02 0.411±0.09 0.351±0.03 0.068±0.02
ENSMUST00000119718 0.206±0.16 0.161±0.01 0.130±0.00 0.012±0.00 0.424±0.09 0.141±0.06 0.132±0.04 0.092±0.07 0.145±0.08 0.037±0.02 0.010±0.00 0.761±0.45 0.417±0.39 0.151±0.10
ENSMUSG00000078503 ENSMUST00000105741 N/A N/A 0.013±0.00 N/A N/A 0.393±0.00 N/A N/A 0.035±0.02 0.268±0.00 0.002±0.00 N/A 0.036±0.01 0.452±0.33
ENSMUST00000105742 0.336±0.05 0.132±0.00 0.009±0.00 0.048±0.04 0.419±0.23 0.208±0.00 0.135±0.01 0.085±0.07 0.036±0.03 0.041±0.01 0.007±0.00 0.048±0.06 0.988±1.51 0.548±0.42
ENSMUST00000128939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136309 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.051±0.01 N/A 0.105±0.00 N/A N/A 0.057±0.00
ENSMUSG00000082352 ENSMUST00000118937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 1.017±1.29
ENSMUSG00000083454 ENSMUST00000117838 N/A N/A 0.086±0.02 1.314±1.32 N/A 0.341±0.13 N/A 0.135±0.00 1.821±3.02 N/A 0.228±0.09 1.527±0.74 0.592±0.56 0.512±0.00
ENSMUSG00000096864 ENSMUST00000179696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 0.207±0.00
ENSMUSG00000097661 ENSMUST00000180968 0.179±0.14 N/A 0.007±0.00 0.029±0.01 0.360±0.22 N/A 0.071±0.00 0.055±0.00 0.033±0.02 0.148±0.00 N/A 0.242±0.32 0.082±0.06 8.505±4.56

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