C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear RNA export factor 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000269437 NXF2B 9606 - X:102360395-102463274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000489531 NXF2B-005 102364632-102365826 processed_transcript
  ENST00000602195 NXF2B-001 102360398-102439932 protein_coding
  ENST00000604395 NXF2B-201 102360396-102380093 protein_coding
  ENST00000618302 NXF2B-007 102360398-102463164 protein_coding
  ENST00000618881 NXF2B-002 102360395-102463274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryTestisENST00000489531ENST00000618881
Transcript ID Lung Ovary Testis
ENST00000489531 N/A 0.063±0.00 N/A
ENST00000618881 0.088±0.00 N/A 0.351±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YD CIL_0000YD_0002 CGP X:102247161-102463274

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 NAS:IEA RNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 ISS:IEA nucleus
GO:0005737 ISS:IEA cytoplasm
GO:0006406 NAS:IEA mRNA export from nucleus
GO:0006810 IEA transport
GO:0007275 ISS multicellular organismal development
GO:0042272 NAS nuclear RNA export factor complex
GO:0050658 ISS RNA transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055076 nxf1 nuclear RNA export factor 1 protein_coding Danio_rerio
ENSDARG00000086017 NXF1 (2 of 4) protein_coding Danio_rerio
ENSDARG00000089034 NXF1 (3 of 4) protein_coding Danio_rerio
ENSDARG00000095404 NXF1 (4 of 4) protein_coding Danio_rerio
ENSMUSG00000009941 Nxf2 nuclear RNA export factor 2 protein_coding Mus_musculus
ENSMUSG00000031410 Nxf7 nuclear RNA export factor 7 protein_coding Mus_musculus

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