C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear RNA export factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055076 nxf1 7955 - 21:26058501-26071321 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077381 nxf1-001 26058501-26071321 protein_coding
  ENSDART00000148966 nxf1-002 26058501-26071321 retained_intron

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077381ENSDART00000148966
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077381 11.320±0.00 8.835±1.75 8.074±0.00 3.595±0.00 4.445±0.00
ENSDART00000148966 13.834±2.10 5.165±1.07 5.521±0.05 1.702±0.00 2.280±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006406 IEA mRNA export from nucleus
GO:0006810 IEA transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126952 NXF5 nuclear RNA export factor 5 protein_coding Homo_sapiens
ENSG00000147206 NXF3 nuclear RNA export factor 3 protein_coding Homo_sapiens
ENSG00000162231 NXF1 nuclear RNA export factor 1 protein_coding Homo_sapiens
ENSG00000269405 NXF2 nuclear RNA export factor 2 protein_coding Homo_sapiens
ENSG00000269437 NXF2B nuclear RNA export factor 2B protein_coding Homo_sapiens
ENSMUSG00000009941 Nxf2 nuclear RNA export factor 2 protein_coding Mus_musculus
ENSMUSG00000010097 Nxf1 nuclear RNA export factor 1 protein_coding Mus_musculus
ENSMUSG00000031410 Nxf7 nuclear RNA export factor 7 protein_coding Mus_musculus
ENSMUSG00000057000 Nxf3 nuclear RNA export factor 3 protein_coding Mus_musculus

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